RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MAB21L3Q8N8X9 362 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 LARP4BQ92615 738 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 SCLT1Q96NL6 688 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 TPX2Q9ULW0 747 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 POTEMA6NI47 508 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 CALCRLQ16602 461 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 COBLL1Q53SF7 1204 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 PDXDC1Q6P996 788 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 REXO1Q8N1G1 1221 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 SH2D3CQ8N5H7 860 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 SH3GL3Q99963 347 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 SPZ1Q9BXG8 430 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 UBA5Q9GZZ9 404 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 BATF3Q9NR55 127 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 SPATS2LQ9NUQ6 558 aaKnown RBP17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 FRMD3A2A2Y4 597 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 IRF6O14896 467 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 HDLBPQ00341 1268 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 GUCY1A3Q02108 690 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 GRAPQ13588 217 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 KLHDC7AQ5VTJ3 777 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 GRAPLQ8TC17 118 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 RSRC1Q96IZ7 334 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 NOX5Q96PH1 765 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 AFF2P51816 1311 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 UBR3Q6ZT12 1888 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 ROBO3Q96MS0 1386 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 ESYT3A0FGR9 886 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 ZSCAN5CA6NGD5 496 aaPredicted RBP17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 SLC37A4O43826 429 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 TDP2O95551 362 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 ADCY2Q08462 1091 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 LRRC55Q6ZSA7 311 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 GUF1Q8N442 669 aaKnown RBP17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 ZIM3Q96PE6 472 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 EYA3Q99504 573 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 NUDT12Q9BQG2 462 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 POLD4Q9HCU8 107 aa17.54■□□□□ 0.4
CHMP1A-201ENST00000397901 FGFR1OPO95684 399 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 AP1ARQ63HQ0 302 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 PJA2O43164 708 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 GCKP35557 465 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 MDH1P40925 334 aaKnown RBP17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 E2F5Q15329 346 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 ASTE1Q2TB18 679 aaPredicted RBP17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 HGSNATQ68CP4 663 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 KCNK18Q7Z418 384 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 SEPT12Q8IYM1 358 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 CNBD1Q8NA66 436 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 IFT81Q8WYA0 676 aa17.53■□□□□ 0.4
CHMP1A-201ENST00000397901 PVALEFA0A1B0GWK0 134 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 BAG3O95817 575 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 FTCDO95954 541 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 GLI1P08151 1106 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 ADRA2BP18089 450 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 NR1D1P20393 614 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 TNFRSF8P28908 595 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 CARSP49589 748 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 LRRC63Q05C16 580 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 KCNMA1Q12791 1236 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 ENOX2Q16206 610 aaKnown RBP17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 TAX1BP1Q86VP1 789 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 C3orf20Q8ND61 904 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 SNX29Q8TEQ0 813 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 DDX12PQ92771 950 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 HOOK2Q96ED9 719 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 STK17AQ9UEE5 414 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 NFU1Q9UMS0 254 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 EP400Q96L91 3159 aa17.52■□□□□ 0.4
CHMP1A-201ENST00000397901 CLSTN1O94985 981 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 KRT14P02533 472 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 FAM153BP0C7A2 387 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 CDK8P49336 464 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 RNASE9P60153 205 aaKnown RBP17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 FAM153CQ494X1 144 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 CFAP221Q4G0U5 840 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 RAD54LQ92698 747 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 TATDN2Q93075 761 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 COA7Q96BR5 231 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 MTMR9Q96QG7 549 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 TSG101Q99816 390 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 KANSL2Q9H9L4 492 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 ANKIB1Q9P2G1 1089 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 FAM153AQ9UHL3 310 aa17.52■□□□□ 0.39
CHMP1A-201ENST00000397901 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 SEC24CP53992 1094 aa17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 ARID5AQ03989 594 aa17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 TMEM266Q2M3C6 531 aa17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 CCDC43Q96MW1 224 aaKnown RBP17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 HAUS2Q9NVX0 235 aa17.51■□□□□ 0.39
CHMP1A-201ENST00000397901 USP17L5A8MUK1 530 aa17.5■□□□□ 0.39
CHMP1A-201ENST00000397901 PALMO75781 387 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms