RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 UNC45AQ9H3U1 944 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 VTA1Q9NP79 307 aa21.28■■□□□ 1
TSPAN4-204ENST00000397404 PVALEFA0A1B0GWK0 134 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 RGS20O76081 388 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 HOXC6P09630 235 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 CAPNS2Q96L46 248 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 PURBQ96QR8 312 aaKnown RBP21.27■■□□□ 1
TSPAN4-204ENST00000397404 ZSWIM4Q9H7M6 989 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 JPH1Q9HDC5 661 aaPredicted RBP21.27■■□□□ 1
TSPAN4-204ENST00000397404 KIAA1024Q9UPX6 916 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 ASTN1O14525 1302 aa21.27■■□□□ 1
TSPAN4-204ENST00000397404 PEX10O60683 326 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 SPATA31C1P0DKV0 1188 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 AFMP43652 599 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 TRIM9Q9C026 710 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 BLOC1S4Q9NUP1 217 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 SLC9A2Q9UBY0 812 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 PCDHA10Q9Y5I2 948 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 KIAA1217Q5T5P2 1943 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 SLITRK3O94933 977 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 EYA4O95677 639 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 PGK2P07205 417 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 QARSP47897 775 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 CYP4F22Q6NT55 531 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 SCFD2Q8WU76 684 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 FGD4Q96M96 766 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 CPA4Q9UI42 421 aa21.26■□□□□ 0.99
TSPAN4-204ENST00000397404 LRRC37A2A6NM11 1700 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 POTEB3A0JP26 581 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 MED24O75448 989 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 PSAPP07602 524 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 CRHR2Q13324 411 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 MORC3Q14149 939 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 TTLL4Q14679 1199 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 MORN1Q5T089 497 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 POTEBQ6S5H4 581 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 C4orf19Q8IY42 314 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 SYT2Q8N9I0 419 aaPredicted RBP21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 ATP6V0A1Q93050 837 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 GJA10Q969M2 543 aa21.25■□□□□ 0.99
TSPAN4-204ENST00000397404 PLXNA1Q9UIW2 1896 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 EML1O00423 815 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 PLA2G4BP0C869 781 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 ZNF165P49910 485 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 PSMC5P62195 406 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 MAP2K5Q13163 448 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 PSMD2Q13200 908 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 ANO6Q4KMQ2 910 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 MIS18BP1Q6P0N0 1132 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 METTL7BQ6UX53 244 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 ARMCX2Q7L311 632 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 NUDT12Q9BQG2 462 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 TIPINQ9BVW5 301 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 DBR1Q9UK59 544 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 SAMM50Q9Y512 469 aa21.24■□□□□ 0.99
TSPAN4-204ENST00000397404 CHMP2AO43633 222 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 ATP9AO75110 1047 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 RHOBTB3O94955 611 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 RPN1P04843 607 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 RGS2P41220 211 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 GAS2L3Q86XJ1 694 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 ANP32BQ92688 251 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 MTRQ99707 1265 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 LXNQ9BS40 222 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 ABHD16BQ9H3Z7 469 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 MAN1B1Q9UKM7 699 aa21.23■□□□□ 0.99
TSPAN4-204ENST00000397404 RBM47A0AV96 593 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 SMTNL1A8MU46 457 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 NKRFO15226 690 aaKnown RBP eCLIP21.22■□□□□ 0.991e-6■■■□□ 15.9
TSPAN4-204ENST00000397404 COBLO75128 1261 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 ATG7O95352 703 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 ERCC5P28715 1186 aaPredicted RBP21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 STIM1Q13586 685 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 COBLL1Q53SF7 1204 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 OLFML2BQ68BL8 750 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 SEPT14Q6ZU15 432 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 UNC13DQ70J99 1090 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 DYDC2Q96IM9 177 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 MAML3Q96JK9 1138 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 PPME1Q9Y570 386 aa21.22■□□□□ 0.99
TSPAN4-204ENST00000397404 POTEFA5A3E0 1075 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 FOXN1O15353 648 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 PRR29P0C7W0 189 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 SLC12A3P55017 1021 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 FCGRTP55899 365 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 TPM4P67936 248 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 CUL4BQ13620 913 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 ECM1Q16610 540 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 ZNF658Q5TYW1 1059 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 POTEGQ6S5H5 508 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 OTUD6AQ7L8S5 288 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 TPH2Q8IWU9 490 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 TRMT44Q8IYL2 757 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 TINF2Q9BSI4 451 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 ANKEF1Q9NU02 776 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 NRBP1Q9UHY1 535 aa21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 DDX41Q9UJV9 622 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-204ENST00000397404 IKBKBO14920 756 aa21.2■□□□□ 0.98
TSPAN4-204ENST00000397404 KIF20AO95235 890 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms