RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CRYGNQ8WXF5 182 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 CTAGE1Q96RT6 745 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 JPH1Q9HDC5 661 aaPredicted RBP16.57■□□□□ 0.24
SEC13-208ENST00000397109 PKD2L1Q9P0L9 805 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 SLC9A2Q9UBY0 812 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 KAT6AQ92794 2004 aa16.57■□□□□ 0.24
SEC13-208ENST00000397109 GSTTP1A0A1W2PQM5 241 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 ARP10275 920 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 RASIP1Q5U651 963 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 SMARCAD1Q9H4L7 1026 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 AGO4Q9HCK5 861 aaKnown RBP16.56■□□□□ 0.24
SEC13-208ENST00000397109 PCDHA4Q9UN74 947 aa16.56■□□□□ 0.24
SEC13-208ENST00000397109 SELPP16109 830 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 XBP1P17861 261 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 HOXC8P31273 242 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
SEC13-208ENST00000397109 DEFB123Q8N688 67 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 ATP6V0A1Q93050 837 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 RNPEPQ9H4A4 650 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
SEC13-208ENST00000397109 FAM86B1E9PN63 330 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 FAM86B2P0C5J1 330 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 CKBP12277 381 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 ACTN1P12814 892 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 CIITAP33076 1130 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 USP11P51784 963 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 ZNF200P98182 395 aaPredicted RBP16.54■□□□□ 0.24
SEC13-208ENST00000397109 LRRC8DQ7L1W4 858 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 DEFB128Q7Z7B8 93 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 SERINC5Q86VE9 423 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 TRIM50Q86XT4 487 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 BLIDQ8IZY5 108 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 RASGRP4Q8TDF6 673 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 WASF1Q92558 559 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
SEC13-208ENST00000397109 GLG1Q92896 1179 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 TNPO1Q92973 898 aaKnown RBP16.54■□□□□ 0.24
SEC13-208ENST00000397109 AZI2Q9H6S1 392 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 TELO2Q9Y4R8 837 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 SZT2Q5T011 3432 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 IGLV3-22A0A075B6J6 115 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 ADAMTS3O15072 1205 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 LGR5O75473 907 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 ACTR2P61160 394 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 ITGB3BPQ13352 177 aaPredicted RBP16.54■□□□□ 0.24
SEC13-208ENST00000397109 OTOP2Q7RTS6 562 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 EMSYQ7Z589 1322 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 NRCAMQ92823 1304 aa16.54■□□□□ 0.24
SEC13-208ENST00000397109 TMEM265A0A087WTH1 108 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 IPO5O00410 1097 aaKnown RBP16.53■□□□□ 0.24
SEC13-208ENST00000397109 HIC1Q14526 733 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 ME3Q16798 604 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 TRIM71Q2Q1W2 868 aaKnown RBP16.53■□□□□ 0.24
SEC13-208ENST00000397109 ZNF697Q5TEC3 545 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 VWCEQ96DN2 955 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 FTOQ9C0B1 505 aaKnown RBP eCLIP16.53■□□□□ 0.24
SEC13-208ENST00000397109 TBC1D22BQ9NU19 505 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 SETD4Q9NVD3 440 aa16.53■□□□□ 0.24
SEC13-208ENST00000397109 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
SEC13-208ENST00000397109 SCN5AQ14524 2016 aa16.52■□□□□ 0.24
SEC13-208ENST00000397109 TREHO43280 583 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 ST18O60284 1047 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 CAND2O75155 1236 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 ATG7O95352 703 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 PRR16Q569H4 304 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 PLPPR4Q7Z2D5 763 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 GTF3C6Q969F1 213 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 AIFM3Q96NN9 605 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 MTMR10Q9NXD2 777 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 TCEAL9Q9UHQ7 104 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 SLC4A7Q9Y6M7 1214 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 TANC1Q9C0D5 1861 aa16.52■□□□□ 0.23
SEC13-208ENST00000397109 TET1Q8NFU7 2136 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 ZBBXA8MT70 800 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 M0R2N6 131 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 MARK3P27448 753 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 SLC26A2P50443 739 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 STAT5BP51692 787 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 ADAM17P78536 824 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 ZNF618Q5T7W0 954 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 Q7L0L9 218 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 NECAB1Q8N987 351 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 TBCKQ8TEA7 893 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 PCYT2Q99447 389 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 PHF20Q9BVI0 1012 aa16.51■□□□□ 0.23
SEC13-208ENST00000397109 CXXC1Q9P0U4 656 aaPredicted RBP16.51■□□□□ 0.23
SEC13-208ENST00000397109 LAMA2P24043 3122 aaKnown RBP16.51■□□□□ 0.23
SEC13-208ENST00000397109 RRN3P2A6NIE6 340 aa16.5■□□□□ 0.23
SEC13-208ENST00000397109 DHX15O43143 795 aaKnown RBP16.5■□□□□ 0.23
SEC13-208ENST00000397109 BAIAP3O94812 1187 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms