RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 PNMA1Q8ND90 353 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 CELF4Q9BZC1 486 aaKnown RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 NEUROG2Q9H2A3 272 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 TMBIM4Q9HC24 238 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 TFCP2L1Q9NZI6 479 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 AMACRQ9UHK6 382 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 NARFQ9UHQ1 456 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 MCM8Q9UJA3 840 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 MYMKA6NI61 221 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 RASSF9O75901 435 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 TM4SF1P30408 202 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 RCAN1P53805 252 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 AMPD3Q01432 767 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 DDR1Q08345 913 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 GLE1Q53GS7 698 aaKnown RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 HVCN1Q96D96 273 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 TAF1DQ9H5J8 278 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 MKNK2Q9HBH9 465 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 ATP8A1Q9Y2Q0 1164 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 MYH2Q9UKX2 1941 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 OR52Z1P0C646 297 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 ITGA4P13612 1032 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 COPB2P35606 906 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 SCTRP47872 440 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 IFNAR2P48551 515 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 ACCSLQ4AC99 568 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 PREPLQ4J6C6 727 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 TBC1D1Q86TI0 1168 aaPredicted RBP10.79□□□□□ -0.68
TRIM39-203ENST00000396547 AMIGO3Q86WK7 504 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 NLGN1Q8N2Q7 840 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 WHAMMQ8TF30 809 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 BAP1Q92560 729 aa10.79□□□□□ -0.68
TRIM39-203ENST00000396547 CHD4Q14839 1912 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 A0A1W2PQJ5 194 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 KRIT1O00522 736 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 DHX9Q08211 1270 aaKnown RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 ZNF844Q08AG5 666 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 TRAPPC3LQ5T215 181 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 FAM228AQ86W67 206 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 MIEF2Q96C03 454 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 RIOK1Q9BRS2 568 aaKnown RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 DDX60Q8IY21 1712 aaKnown RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 TLR2O60603 784 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 CDK17Q00537 523 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 ITIH3Q06033 890 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 UAP1Q16222 522 aaPredicted RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 ANKRD20A8PQ5CZ79 823 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 GKAP1Q5VSY0 366 aaPredicted RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 SLC44A5Q8NCS7 719 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 TACO1Q9BSH4 297 aaKnown RBP10.78□□□□□ -0.68
TRIM39-203ENST00000396547 CCSER1Q9C0I3 900 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 NID2Q14112 1375 aa10.78□□□□□ -0.68
TRIM39-203ENST00000396547 MYH6P13533 1939 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 POTEMA6NI47 508 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 SART1O43290 800 aaKnown RBP10.77□□□□□ -0.68
TRIM39-203ENST00000396547 CTNND1O60716 968 aaKnown RBP10.77□□□□□ -0.68
TRIM39-203ENST00000396547 ACTN1P12814 892 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 PPP2R2AP63151 447 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 KCNMA1Q12791 1236 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 CLEC4GQ6UXB4 293 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 USP38Q8NB14 1042 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 SGSM3Q96HU1 749 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 LUC7LQ9NQ29 371 aaKnown RBP10.77□□□□□ -0.68
TRIM39-203ENST00000396547 L3MBTL1Q9Y468 752 aa10.77□□□□□ -0.68
TRIM39-203ENST00000396547 SMCO2A6NFE2 343 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.69
TRIM39-203ENST00000396547 VIMP08670 466 aaKnown RBP10.77□□□□□ -0.69
TRIM39-203ENST00000396547 GYS1P13807 737 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 PEX19P40855 299 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 MYO1EQ12965 1108 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 PPP4R3AQ6IN85 833 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 SMIM5Q71RC9 77 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 ZSCAN29Q8IWY8 852 aaPredicted RBP10.77□□□□□ -0.69
TRIM39-203ENST00000396547 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
TRIM39-203ENST00000396547 TSG101Q99816 390 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 PNMA2Q9UL42 364 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 MYH7P12883 1935 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 GRID2IPA4D2P6 1211 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 ERVV-1B6SEH8 477 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 TTI1O43156 1089 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 NBPF9Q3BBW0 867 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 HGSNATQ68CP4 663 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 TRIM51Q9BSJ1 452 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 UBA5Q9GZZ9 404 aa10.77□□□□□ -0.69
TRIM39-203ENST00000396547 SAP30BPQ9UHR5 308 aaKnown RBP10.77□□□□□ -0.69
TRIM39-203ENST00000396547 TRAPPC3O43617 180 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 SLCO1A2P46721 670 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 NAB2Q15742 525 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 CAVIN4Q5BKX8 364 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 FIGNQ5HY92 759 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 SOGA3Q5TF21 947 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 C6orf89Q6UWU4 347 aa10.76□□□□□ -0.69
TRIM39-203ENST00000396547 RUFY4Q6ZNE9 571 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms