RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 HDAC11Q96DB2 347 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 BEGAINQ9BUH8 593 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 APOL6Q9BWW8 343 aa18.77■□□□□ 0.6
UBFD1-201ENST00000395878 TMTC3Q6ZXV5 915 aa18.77■□□□□ 0.59
UBFD1-201ENST00000395878 FAM149B1Q96BN6 582 aa18.77■□□□□ 0.59
UBFD1-201ENST00000395878 SNX25Q9H3E2 840 aa18.77■□□□□ 0.59
UBFD1-201ENST00000395878 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 SURF1Q15526 300 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 CYP4F22Q6NT55 531 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 SESN3P58005 492 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 DIXDC1Q155Q3 683 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 SUPT20HL1Q3ZLR7 823 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 DPP9Q86TI2 863 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 RSPH3Q86UC2 560 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 FOXP4Q8IVH2 680 aaPredicted RBP18.76■□□□□ 0.59
UBFD1-201ENST00000395878 ZNF579Q8NAF0 562 aaKnown RBP18.76■□□□□ 0.59
UBFD1-201ENST00000395878 NEK9Q8TD19 979 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 MCAMP43121 646 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 EIF3BP55884 814 aaKnown RBP18.76■□□□□ 0.59
UBFD1-201ENST00000395878 BAG5Q9UL15 447 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 PSAPP07602 524 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 ATP1A3P13637 1013 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 OSBPP22059 807 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 SERPINB6P35237 376 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 ARL4AP40617 200 aa18.76■□□□□ 0.59
UBFD1-201ENST00000395878 TFAMQ00059 246 aaKnown RBP18.76■□□□□ 0.59
UBFD1-201ENST00000395878 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.76■□□□□ 0.59
UBFD1-201ENST00000395878 WDR19Q8NEZ3 1342 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 KIF1BO60333 1816 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 CTNND1O60716 968 aaKnown RBP18.75■□□□□ 0.59
UBFD1-201ENST00000395878 ACTN1P12814 892 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 AP3B2Q13367 1082 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 NNTQ13423 1086 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 TMED2Q15363 201 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 EXOC4Q96A65 974 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 ARHGAP27Q6ZUM4 889 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 RAPH1Q70E73 1250 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 PIGBQ92521 554 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 SLC38A10Q9HBR0 1119 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 PLEKHA8P1O95397 391 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 CYP27A1Q02318 531 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 TOB2Q14106 344 aaPredicted RBP18.75■□□□□ 0.59
UBFD1-201ENST00000395878 EFCAB13Q8IY85 973 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 SDCCAG3Q96C92 435 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 CLCN6P51797 869 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 SUSD4Q5VX71 490 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 RAB44Q7Z6P3 723 aaPredicted RBP18.75■□□□□ 0.59
UBFD1-201ENST00000395878 WDR70Q9NW82 654 aa18.75■□□□□ 0.59
UBFD1-201ENST00000395878 ZNF233A6NK53 670 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 ZBTB24O43167 697 aaPredicted RBP18.74■□□□□ 0.59
UBFD1-201ENST00000395878 CUL1Q13616 776 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 RHOT2Q8IXI1 618 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 S100BP04271 92 aaPredicted RBP18.74■□□□□ 0.59
UBFD1-201ENST00000395878 DR1Q01658 176 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 ALKBH5Q6P6C2 394 aaKnown RBP18.74■□□□□ 0.59
UBFD1-201ENST00000395878 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 UNC13DQ70J99 1090 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 LRGUKQ96M69 825 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 RRP15Q9Y3B9 282 aaKnown RBP18.74■□□□□ 0.59
UBFD1-201ENST00000395878 SHROOM2Q13796 1616 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 TBC1D10BQ4KMP7 808 aaPredicted RBP18.74■□□□□ 0.59
UBFD1-201ENST00000395878 RSRC2Q7L4I2 434 aaKnown RBP18.74■□□□□ 0.59
UBFD1-201ENST00000395878 METTL23Q86XA0 190 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 COA1Q9GZY4 146 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 ABCA8O94911 1581 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 KDM6BO15054 1643 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 KSR1Q8IVT5 923 aa18.74■□□□□ 0.59
UBFD1-201ENST00000395878 RFX7Q2KHR2 1363 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 TTC4O95801 387 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 MT-ND3P03897 115 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 RCAN1P53805 252 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 EMBQ6PCB8 327 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 DARS2Q6PI48 645 aaKnown RBP18.73■□□□□ 0.59
UBFD1-201ENST00000395878 NLRP7Q8WX94 980 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 FMO2Q99518 471 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 RASGRF2O14827 1237 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 DDIT3P35638 169 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 STX1BP61266 288 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 ZKSCAN8Q15776 578 aaPredicted RBP18.73■□□□□ 0.59
UBFD1-201ENST00000395878 MTERF2Q49AM1 385 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 CCNYQ8ND76 341 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 CASP8Q14790 479 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 SMYD2Q9NRG4 433 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 CCDC188H7C350 402 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 KPNA2P52292 529 aaKnown RBP18.73■□□□□ 0.59
UBFD1-201ENST00000395878 BASP1P80723 227 aaKnown RBP18.73■□□□□ 0.59
UBFD1-201ENST00000395878 KCTD6Q8NC69 237 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 MTA3Q9BTC8 594 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 TUBB6Q9BUF5 446 aa18.73■□□□□ 0.59
UBFD1-201ENST00000395878 DIS3Q9Y2L1 958 aaKnown RBP18.73■□□□□ 0.59
UBFD1-201ENST00000395878 MYO1EQ12965 1108 aa18.72■□□□□ 0.59
UBFD1-201ENST00000395878 NXF1Q9UBU9 619 aaKnown RBP18.72■□□□□ 0.59
UBFD1-201ENST00000395878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.72■□□□□ 0.59
UBFD1-201ENST00000395878 LRRD1A4D1F6 860 aa18.72■□□□□ 0.59
UBFD1-201ENST00000395878 DCAF4Q8WV16 495 aa18.72■□□□□ 0.59
UBFD1-201ENST00000395878 MXD3Q9BW11 206 aa18.72■□□□□ 0.59
UBFD1-201ENST00000395878 AP5M1Q9H0R1 490 aa18.72■□□□□ 0.59
UBFD1-201ENST00000395878 BHMT2Q9H2M3 363 aa18.72■□□□□ 0.59
UBFD1-201ENST00000395878 RCN2Q14257 317 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms