RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 PDE6CP51160 858 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 DIXDC1Q155Q3 683 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 KIAA0753Q2KHM9 967 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 ZNF362Q5T0B9 420 aaPredicted RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 LENG1Q96BZ8 264 aaPredicted RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 LRRC45Q96CN5 670 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 TIPINQ9BVW5 301 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 DPH5Q9H2P9 285 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 ADAM7Q9H2U9 754 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 CAPN11Q9UMQ6 739 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 LRCH1Q9Y2L9 728 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 PCDHB6Q9Y5E3 794 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 ASLP04424 464 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 TARSP26639 723 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 ZNF554Q86TJ5 538 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 RIBC1Q8N443 379 aaPredicted RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 DTX3LQ8TDB6 740 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 ZNF653Q96CK0 615 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 MPP4Q96JB8 637 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 AP1M1Q9BXS5 423 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 TUT1Q9H6E5 874 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 R3HDM2Q9Y2K5 976 aaKnown RBP13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 SUGT1Q9Y2Z0 365 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 MYH2Q9UKX2 1941 aa13.63□□□□□ -0.23
SLC28A1-203ENST00000394573 SPDYE16A6NNV3 312 aaPredicted RBP13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 BTBD18B2RXH4 712 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 EPHB2P29323 1055 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 SOGA3Q5TF21 947 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 LPIN2Q92539 896 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 TRIM11Q96F44 468 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 PAGE5Q96GU1 130 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 AZI2Q9H6S1 392 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 TMEM247A6NEH6 219 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 PRC1O43663 620 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 TOB1P50616 345 aaPredicted RBP13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 TTLL12Q14166 644 aaPredicted RBP13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 CWF19L2Q2TBE0 894 aaKnown RBP13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 SPATA20Q8TB22 786 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 NRG4Q8WWG1 115 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 KCNJ14Q9UNX9 436 aa13.62□□□□□ -0.23
SLC28A1-203ENST00000394573 EIF3FO00303 357 aaPredicted RBP13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SEMA3EO15041 775 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 EHHADHQ08426 723 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 ZNF449Q6P9G9 518 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 C2CD5Q86YS7 1000 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 LRRC8CQ8TDW0 803 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 HAUS1Q96CS2 278 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 NSRP1Q9H0G5 558 aaKnown RBP13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 ISCUQ9H1K1 167 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 THAP9Q9H5L6 903 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 CTTNBP2NLQ9P2B4 639 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 GDAQ9Y2T3 454 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 PREX2Q70Z35 1606 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 AKR1B10O60218 316 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SUN1O94901 812 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SKIP12755 728 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 PRLRP16471 622 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 XBP1P17861 261 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SLC4A8Q2Y0W8 1093 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SH3D19Q5HYK7 790 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 UBAP2Q5T6F2 1119 aaKnown RBP13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 SPATA24Q86W54 205 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 TUBGCP5Q96RT8 1024 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 MYL10Q9BUA6 226 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 DDX47Q9H0S4 455 aaKnown RBP13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 DENND2DQ9H6A0 471 aaPredicted RBP13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 DENND2AQ9ULE3 1009 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 ANKRD26Q9UPS8 1709 aa13.61□□□□□ -0.23
SLC28A1-203ENST00000394573 A0A0G2JS52 829 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 WFS1O76024 890 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 OR6B1O95007 311 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 AFPP02771 609 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 PLCG2P16885 1265 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 ZFXP17010 805 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 NEK3P51956 506 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 NLRP5P59047 1200 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 HPCAP84074 193 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 PAK1Q13153 545 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 MEA1Q16626 185 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 PHLDB3Q6NSJ2 640 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 CCDC82Q8N4S0 544 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 ANKLE1Q8NAG6 615 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 TLCD1Q96CP7 247 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 RAB3IPQ96QF0 476 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 GOLPH3Q9H4A6 298 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 DDX18Q9NVP1 670 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 CLIC5Q9NZA1 410 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 PTPREP23469 700 aa13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 EIF4A3P38919 411 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 ADARP55265 1226 aaKnown RBP13.6□□□□□ -0.23
SLC28A1-203ENST00000394573 MGAT5Q09328 741 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms