RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CRYGNQ8WXF5 182 aa35.01■■■■□ 3.2
CMTM4-202ENST00000394106 VWCEQ96DN2 955 aa35.01■■■■□ 3.2
CMTM4-202ENST00000394106 AIFM3Q96NN9 605 aa35.01■■■■□ 3.2
CMTM4-202ENST00000394106 CXXC1Q9P0U4 656 aaPredicted RBP35.01■■■■□ 3.2
CMTM4-202ENST00000394106 PFKMP08237 780 aa35■■■■□ 3.19
CMTM4-202ENST00000394106 ITGB3BPQ13352 177 aaPredicted RBP35■■■■□ 3.19
CMTM4-202ENST00000394106 C8orf34Q49A92 452 aa35■■■■□ 3.19
CMTM4-202ENST00000394106 FAM109BQ6ICB4 259 aaPredicted RBP35■■■■□ 3.19
CMTM4-202ENST00000394106 NIPA1Q7RTP0 329 aa35■■■■□ 3.19
CMTM4-202ENST00000394106 ATP6V0A1Q93050 837 aa35■■■■□ 3.19
CMTM4-202ENST00000394106 RNPEPQ9H4A4 650 aa35■■■■□ 3.19
CMTM4-202ENST00000394106 NFASCO94856 1347 aa35■■■■□ 3.19
CMTM4-202ENST00000394106 DTNBO60941 627 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 CKBP12277 381 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 SELPP16109 830 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 LRRC8DQ7L1W4 858 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 GLG1Q92896 1179 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 WNT8BQ93098 351 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 UIMC1Q96RL1 719 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 FTOQ9C0B1 505 aaKnown RBP eCLIP34.99■■■■□ 3.19
CMTM4-202ENST00000394106 SETD4Q9NVD3 440 aa34.99■■■■□ 3.19
CMTM4-202ENST00000394106 ZNF697Q5TEC3 545 aa34.98■■■■□ 3.19
CMTM4-202ENST00000394106 FAM161BQ96MY7 647 aa34.98■■■■□ 3.19
CMTM4-202ENST00000394106 PCDHA4Q9UN74 947 aa34.98■■■■□ 3.19
CMTM4-202ENST00000394106 IGLV3-22A0A075B6J6 115 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 ZBBXA8MT70 800 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 DDX39AO00148 427 aaKnown RBP34.97■■■■□ 3.19
CMTM4-202ENST00000394106 MARK3P27448 753 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 HOXC8P31273 242 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 RBL2Q08999 1139 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 SERINC5Q86VE9 423 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 NECAB1Q8N987 351 aa34.97■■■■□ 3.19
CMTM4-202ENST00000394106 LAMA2P24043 3122 aaKnown RBP34.97■■■■□ 3.19
CMTM4-202ENST00000394106 GRXCR1A8MXD5 290 aa34.96■■■■□ 3.19
CMTM4-202ENST00000394106 TREHO43280 583 aa34.96■■■■□ 3.19
CMTM4-202ENST00000394106 ACTR2P61160 394 aa34.96■■■■□ 3.19
CMTM4-202ENST00000394106 TRIM71Q2Q1W2 868 aaKnown RBP34.96■■■■□ 3.19
CMTM4-202ENST00000394106 SMARCAD1Q9H4L7 1026 aa34.96■■■■□ 3.19
CMTM4-202ENST00000394106 ERAP1Q9NZ08 941 aa34.96■■■■□ 3.19
CMTM4-202ENST00000394106 LARGE1O95461 756 aa34.95■■■■□ 3.19
CMTM4-202ENST00000394106 GNAT1P11488 350 aa34.95■■■■□ 3.19
CMTM4-202ENST00000394106 ME3Q16798 604 aa34.95■■■■□ 3.19
CMTM4-202ENST00000394106 BLIDQ8IZY5 108 aa34.95■■■■□ 3.19
CMTM4-202ENST00000394106 MTMR10Q9NXD2 777 aa34.95■■■■□ 3.19
CMTM4-202ENST00000394106 STK36Q9NRP7 1315 aa34.95■■■■□ 3.19
CMTM4-202ENST00000394106 ACTN1P12814 892 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 THPOP40225 353 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 SETQ01105 290 aaPredicted RBP34.94■■■■□ 3.18
CMTM4-202ENST00000394106 PRR16Q569H4 304 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 ZNF618Q5T7W0 954 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 LMBR1Q8WVP7 490 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 ZNF577Q9BSK1 485 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 AZI2Q9H6S1 392 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 KCNJ14Q9UNX9 436 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 SLC4A7Q9Y6M7 1214 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 EMSYQ7Z589 1322 aa34.94■■■■□ 3.18
CMTM4-202ENST00000394106 IPO5O00410 1097 aaKnown RBP34.93■■■■□ 3.18
CMTM4-202ENST00000394106 CTDNEP1O95476 244 aa34.93■■■■□ 3.18
CMTM4-202ENST00000394106 PCYT2Q99447 389 aa34.93■■■■□ 3.18
CMTM4-202ENST00000394106 LGR5O75473 907 aa34.92■■■■□ 3.18
CMTM4-202ENST00000394106 DNAJB2P25686 324 aa34.92■■■■□ 3.18
CMTM4-202ENST00000394106 FAM177A1Q8N128 213 aaPredicted RBP34.92■■■■□ 3.18
CMTM4-202ENST00000394106 DAGLBQ8NCG7 672 aa34.92■■■■□ 3.18
CMTM4-202ENST00000394106 GTF3C6Q969F1 213 aa34.92■■■■□ 3.18
CMTM4-202ENST00000394106 KAT6AQ92794 2004 aa34.92■■■■□ 3.18
CMTM4-202ENST00000394106 NRCAMQ92823 1304 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 CCNE2O96020 404 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 CIITAP33076 1130 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 PBX2P40425 430 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 PPFIA1Q13136 1202 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 GPNMBQ14956 572 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 GALNT17Q6IS24 598 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 TBCKQ8TEA7 893 aa34.91■■■■□ 3.18
CMTM4-202ENST00000394106 ORC3Q9UBD5 711 aaPredicted RBP34.91■■■■□ 3.18
CMTM4-202ENST00000394106 NBNO60934 754 aa34.9■■■■□ 3.18
CMTM4-202ENST00000394106 PARNO95453 639 aaKnown RBP34.9■■■■□ 3.18
CMTM4-202ENST00000394106 NPY5RQ15761 445 aa34.9■■■■□ 3.18
CMTM4-202ENST00000394106 TRAF7Q6Q0C0 670 aa34.9■■■■□ 3.18
CMTM4-202ENST00000394106 PBX4Q9BYU1 374 aa34.9■■■■□ 3.18
CMTM4-202ENST00000394106 C22orf23Q9BZE7 217 aa34.9■■■■□ 3.18
CMTM4-202ENST00000394106 TET1Q8NFU7 2136 aa34.9■■■■□ 3.18
CMTM4-202ENST00000394106 DHX15O43143 795 aaKnown RBP34.89■■■■□ 3.18
CMTM4-202ENST00000394106 XBP1P17861 261 aa34.89■■■■□ 3.18
CMTM4-202ENST00000394106 USP11P51784 963 aa34.89■■■■□ 3.18
CMTM4-202ENST00000394106 GRIK4Q16099 956 aa34.89■■■■□ 3.18
CMTM4-202ENST00000394106 TTYH1Q9H313 450 aaPredicted RBP34.89■■■■□ 3.18
CMTM4-202ENST00000394106 SEMA6BQ9H3T3 888 aa34.89■■■■□ 3.18
CMTM4-202ENST00000394106 M0R2N6 131 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 EDIL3O43854 480 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 STAT5BP51692 787 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 ADAM17P78536 824 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 WASF1Q92558 559 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 TIFAQ96CG3 184 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 PHF20Q9BVI0 1012 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 GJB4Q9NTQ9 266 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 TBC1D22BQ9NU19 505 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 TRPC6Q9Y210 931 aa34.88■■■■□ 3.17
CMTM4-202ENST00000394106 RSPH10B2B2RC85 870 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 RBAK-RBAKDNI3L0D1 243 aa34.87■■■■□ 3.17
CMTM4-202ENST00000394106 BACH1O14867 736 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms