RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 ZBTB43O43298 467 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 RTN1Q16799 776 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 SYNE3Q6ZMZ3 975 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 MICALL1Q8N3F8 863 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 GIMAP8Q8ND71 665 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 CYP2W1Q8TAV3 490 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 ATXN2LQ8WWM7 1075 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 KCNB2Q92953 911 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 PGBD1Q96JS3 809 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 JADE2Q9NQC1 790 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 RBM28Q9NW13 759 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 PKD2L1Q9P0L9 805 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 THEGQ9P2T0 379 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 V9GY48 417 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 EMSYQ7Z589 1322 aa20.93■□□□□ 0.94
PDLIM7-205ENST00000393551 SPDYE3A6NKU9 549 aa20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 CTSHP09668 335 aa20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 MTMR1Q13613 665 aa20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 ASB2Q96Q27 587 aa20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 RIC8AQ9NPQ8 531 aa20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 ZNF215Q9UL58 517 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 BRWD1Q9NSI6 2320 aa20.92■□□□□ 0.94
PDLIM7-205ENST00000393551 KLF18A0A0U1RQI7 1052 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 STXBP3O00186 592 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 EFCAB14O75071 495 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 ARHGAP4P98171 946 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 GRB10Q13322 594 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 FAM117BQ6P1L5 589 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 SEPT1Q8WYJ6 367 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 SYMPKQ92797 1274 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 CDHR1Q96JP9 859 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 PCYT2Q99447 389 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 RAD9AQ99638 391 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 ZBED2Q9BTP6 218 aa20.91■□□□□ 0.94
PDLIM7-205ENST00000393551 TCF20Q9UGU0 1960 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 NRCAMQ92823 1304 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 ADAMTS3O15072 1205 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 CAND2O75155 1236 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 NAPAP54920 295 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 KRT32Q14532 448 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 FAM26DQ5JW98 314 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 RUFY4Q6ZNE9 571 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 KCNH7Q9NS40 1196 aa20.9■□□□□ 0.94
PDLIM7-205ENST00000393551 LINC01553A4QN01 128 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 GOLGA8AA7E2F4 631 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 GOLGA8BA8MQT2 603 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 MAFGO15525 162 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 CHRNA1P02708 482 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 GNAT1P11488 350 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 MARK3P27448 753 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 ADD1P35611 737 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 TFF2Q03403 129 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 MARCH8Q5T0T0 291 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 MXRA8Q9BRK3 442 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 SUGCTQ9HAC7 445 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 TMEM260Q9NX78 707 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 BARHL2Q9NY43 387 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 SNX14Q9Y5W7 946 aa20.89■□□□□ 0.93
PDLIM7-205ENST00000393551 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 ARP10275 920 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 HSPA4P34932 840 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 CLK2P49760 499 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 RCAN1P53805 252 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 ERVK-21P61565 698 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 MRPS5P82675 430 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 HTRA4P83105 476 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 APOBRQ0VD83 1088 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 PPP1R18Q6NYC8 613 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 ANO3Q9BYT9 981 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 MTUS1Q9ULD2 1270 aa20.88■□□□□ 0.93
PDLIM7-205ENST00000393551 MBLAC1A4D2B0 266 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 SMCO2A6NFE2 343 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 GTPBP6O43824 516 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 HMGB1P09429 215 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 ADCY7P51828 1080 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 PPFIA1Q13136 1202 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 ITGB3BPQ13352 177 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 GRIK4Q16099 956 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 Q6ZUG5 572 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 RPAINQ86UA6 219 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 MYOCDQ8IZQ8 938 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 GDPD5Q8WTR4 605 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 ZBTB10Q96DT7 871 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 ERAP1Q9NZ08 941 aa20.87■□□□□ 0.93
PDLIM7-205ENST00000393551 MGAT3Q09327 533 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 CEP55Q53EZ4 464 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 SP7Q8TDD2 431 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 SEPT8Q92599 483 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 GLG1Q92896 1179 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 JAKMIP1Q96N16 626 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 SMARCAD1Q9H4L7 1026 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 EHMT1Q9H9B1 1298 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 JPH1Q9HDC5 661 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 SLC9A2Q9UBY0 812 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 INSL6Q9Y581 213 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 LOXHD1Q8IVV2 1947 aa20.86■□□□□ 0.93
PDLIM7-205ENST00000393551 NFASCO94856 1347 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 hCG_1984214I3L0E3 225 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 MEIS1O00470 390 aa20.85■□□□□ 0.93
PDLIM7-205ENST00000393551 FOSP01100 380 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms