RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 A0A0G2JMZ2 1700 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 FAM187AA6NFU0 413 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 GOLIM4O00461 696 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 CTAGE5O15320 804 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 GRIN2DO15399 1336 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 ADCY6O43306 1168 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 GFRA3O60609 400 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 BCAR3O75815 825 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 NDUFB10O96000 172 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 IFIT2P09913 472 aaKnown RBP9.32□□□□□ -0.92
CASP4-201ENST00000393150 ALAS1P13196 640 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 CNTN2Q02246 1040 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 CENPCQ03188 943 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 LAPTM4AQ15012 233 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 PTGISQ16647 500 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 DUSP28Q4G0W2 176 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 B4GALNT3Q6L9W6 998 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 CNKSR3Q6P9H4 555 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 HFE2Q6ZVN8 426 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 CLASRPQ8N2M8 674 aaKnown RBP9.32□□□□□ -0.92
CASP4-201ENST00000393150 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 PPP2R3CQ969Q6 453 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 ARMT1Q9H993 441 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 ARPP21Q9UBL0 812 aaPredicted RBP9.32□□□□□ -0.92
CASP4-201ENST00000393150 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 SLC4A4Q9Y6R1 1079 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 TRANK1O15050 2925 aa9.32□□□□□ -0.92
CASP4-201ENST00000393150 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 H3BQ06 376 aaPredicted RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 LPXNO60711 386 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 MBD4O95243 580 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 GJB5O95377 273 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 TTLL1O95922 423 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 AMHP03971 560 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SLC3A2P08195 630 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 BMP3P12645 472 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SELPP16109 830 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 WDR5P61964 334 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 PURAQ00577 322 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 TBCELQ5QJ74 424 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 CAPN12Q6ZSI9 719 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 FBXO16Q8IX29 292 aaPredicted RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 FTSJ3Q8IY81 847 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 FAM133AQ8N9E0 248 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SCG3Q8WXD2 468 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 EAF2Q96CJ1 260 aaPredicted RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 PABPC5Q96DU9 382 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 PNMA2Q9UL42 364 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 NOP58Q9Y2X3 529 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 CACNA1AO00555 2505 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 GBF1Q92538 1859 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 ASTN1O14525 1302 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 MINDY4BA8MYZ0 360 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 TMEM232C9JQI7 657 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 CDK2AP1O14519 115 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SPINT1O43278 529 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SLC1A4P43007 532 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 RARSP54136 660 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 PDE4BQ07343 736 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 PPP2R5BQ15173 497 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 TLR1Q15399 786 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 FAM117BQ6P1L5 589 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 NSMFQ6X4W1 530 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 LRRC8DQ7L1W4 858 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 SLC9A9Q8IVB4 645 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 ATOH1Q92858 354 aaPredicted RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 KATNBL1Q9H079 304 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 BCL11AQ9H165 835 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 A1CFQ9NQ94 594 aaKnown RBP9.31□□□□□ -0.92
CASP4-201ENST00000393150 CLDND1Q9NY35 253 aa9.31□□□□□ -0.92
CASP4-201ENST00000393150 MEN1O00255 615 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 NRG2O14511 850 aaPredicted RBP9.3□□□□□ -0.92
CASP4-201ENST00000393150 ZP2Q05996 745 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 BMP8AQ7Z5Y6 402 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 LRRC47Q8N1G4 583 aaKnown RBP9.3□□□□□ -0.92
CASP4-201ENST00000393150 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 NEK9Q8TD19 979 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 SCFD2Q8WU76 684 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 STAG1Q8WVM7 1258 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 EDAQ92838 391 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 YME1L1Q96TA2 773 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 GRIP2Q9C0E4 1043 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 NSUN3Q9H649 340 aaKnown RBP9.3□□□□□ -0.92
CASP4-201ENST00000393150 PDGFCQ9NRA1 345 aa9.3□□□□□ -0.92
CASP4-201ENST00000393150 TLR7Q9NYK1 1049 aaKnown RBP9.3□□□□□ -0.92
CASP4-201ENST00000393150 EMSYQ7Z589 1322 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 CYP2D7A0A087X1C5 515 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 LCHNA4D1U4 455 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 LINC01553A4QN01 128 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 PATL2C9JE40 543 aaKnown RBP9.29□□□□□ -0.92
CASP4-201ENST00000393150 PRKAB2O43741 272 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 TSPY3P0CV98 308 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 TSPY8P0CW00 308 aa9.29□□□□□ -0.92
CASP4-201ENST00000393150 CASTP20810 708 aaKnown RBP9.29□□□□□ -0.92
CASP4-201ENST00000393150 GPM6BQ13491 265 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms