RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 FAAP100Q0VG06 881 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 LAMC2Q13753 1193 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 RPS6KA2Q15349 733 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 SF1Q15637 639 aaKnown RBP4.01□□□□□ -1.77
XRN1-202ENST00000392981 NUGGCQ68CJ6 796 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 GALNTL5Q7Z4T8 443 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 OR2C3Q8N628 320 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CCDC191Q8NCU4 936 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 DEPTORQ8TB45 409 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 CUL5Q93034 780 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 UBN1Q9NPG3 1134 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 ANKEF1Q9NU02 776 aa4.01□□□□□ -1.77
XRN1-202ENST00000392981 NCAM2O15394 837 aa4□□□□□ -1.77
XRN1-202ENST00000392981 STAM2O75886 525 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ZIC2O95409 532 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 CD3EP07766 207 aa4□□□□□ -1.77
XRN1-202ENST00000392981 MTHFD1P11586 935 aaKnown RBP4□□□□□ -1.77
XRN1-202ENST00000392981 PTGIRP43119 386 aa4□□□□□ -1.77
XRN1-202ENST00000392981 SRSF2Q01130 221 aaKnown RBP4□□□□□ -1.77
XRN1-202ENST00000392981 SURF1Q15526 300 aa4□□□□□ -1.77
XRN1-202ENST00000392981 PGS1Q32NB8 556 aa4□□□□□ -1.77
XRN1-202ENST00000392981 SLC22A25Q6T423 547 aa4□□□□□ -1.77
XRN1-202ENST00000392981 SRGAP1Q7Z6B7 1085 aa4□□□□□ -1.77
XRN1-202ENST00000392981 CLRN3Q8NCR9 226 aa4□□□□□ -1.77
XRN1-202ENST00000392981 GPBAR1Q8TDU6 330 aa4□□□□□ -1.77
XRN1-202ENST00000392981 RIN2Q8WYP3 895 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 SNX21Q969T3 373 aa4□□□□□ -1.77
XRN1-202ENST00000392981 MTRQ99707 1265 aa4□□□□□ -1.77
XRN1-202ENST00000392981 PYM1Q9BRP8 204 aaKnown RBP4□□□□□ -1.77
XRN1-202ENST00000392981 CCDC68Q9H2F9 335 aa4□□□□□ -1.77
XRN1-202ENST00000392981 CCDC39Q9UFE4 941 aa4□□□□□ -1.77
XRN1-202ENST00000392981 RRP15Q9Y3B9 282 aaKnown RBP4□□□□□ -1.77
XRN1-202ENST00000392981 KDM4FA0A1W2PPD8 638 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ARHGEF37A1IGU5 675 aa4□□□□□ -1.77
XRN1-202ENST00000392981 RTCAO00442 366 aaKnown RBP4□□□□□ -1.77
XRN1-202ENST00000392981 AHCYL1O43865 530 aa4□□□□□ -1.77
XRN1-202ENST00000392981 DHRS4L1P0CG22 281 aa4□□□□□ -1.77
XRN1-202ENST00000392981 PAMP19021 973 aa4□□□□□ -1.77
XRN1-202ENST00000392981 SLC7A1P30825 629 aa4□□□□□ -1.77
XRN1-202ENST00000392981 CASQ1P31415 396 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ARL3P36405 182 aa4□□□□□ -1.77
XRN1-202ENST00000392981 E2F5Q15329 346 aa4□□□□□ -1.77
XRN1-202ENST00000392981 GLIS3Q8NEA6 775 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ZNF496Q96IT1 587 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 RETREG1Q9H6L5 497 aa4□□□□□ -1.77
XRN1-202ENST00000392981 TTC24A2A3L6 582 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 GSTA4O15217 222 aa4□□□□□ -1.77
XRN1-202ENST00000392981 KITP10721 976 aa4□□□□□ -1.77
XRN1-202ENST00000392981 NAT1P18440 290 aa4□□□□□ -1.77
XRN1-202ENST00000392981 BCAR1P56945 870 aa4□□□□□ -1.77
XRN1-202ENST00000392981 PSMC1P62191 440 aaKnown RBP4□□□□□ -1.77
XRN1-202ENST00000392981 ATP11AP98196 1134 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ZUFSPQ96AP4 578 aa4□□□□□ -1.77
XRN1-202ENST00000392981 RUNDC3BQ96NL0 473 aa4□□□□□ -1.77
XRN1-202ENST00000392981 FAM193BQ96PV7 902 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 CYP26B1Q9NR63 512 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ANAPC5Q9UJX4 755 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ST20-MTHFSA0A0A6YYL1 179 aa4□□□□□ -1.77
XRN1-202ENST00000392981 TRIM64CA6NLI5 447 aa4□□□□□ -1.77
XRN1-202ENST00000392981 APOL1O14791 398 aa4□□□□□ -1.77
XRN1-202ENST00000392981 PSMA7O14818 248 aa4□□□□□ -1.77
XRN1-202ENST00000392981 POLD2P49005 469 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ITGA8P53708 1063 aa4□□□□□ -1.77
XRN1-202ENST00000392981 ZNF280AP59817 542 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 AP1B1Q10567 949 aa4□□□□□ -1.77
XRN1-202ENST00000392981 MAPK7Q13164 816 aa4□□□□□ -1.77
XRN1-202ENST00000392981 POSTNQ15063 836 aa4□□□□□ -1.77
XRN1-202ENST00000392981 MCM10Q7L590 875 aa4□□□□□ -1.77
XRN1-202ENST00000392981 WDR63Q8IWG1 891 aa4□□□□□ -1.77
XRN1-202ENST00000392981 SMARCC1Q92922 1105 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 TCF12Q99081 682 aa4□□□□□ -1.77
XRN1-202ENST00000392981 TAF1DQ9H5J8 278 aaPredicted RBP4□□□□□ -1.77
XRN1-202ENST00000392981 PDRG1Q9NUG6 133 aa4□□□□□ -1.77
XRN1-202ENST00000392981 AP4E1Q9UPM8 1137 aa4□□□□□ -1.77
XRN1-202ENST00000392981 A0A1W2PPH5 198 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CCDC66A2RUB6 948 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 FAM227AF5H4B4 570 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 REC8O95072 547 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 TGDSO95455 350 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 KIF11P52732 1056 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 EFR3AQ14156 821 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 KLHL17Q6TDP4 642 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CTNNBL1Q8WYA6 563 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 NELL1Q92832 810 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 RAB24Q969Q5 203 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 PIDD1Q9HB75 910 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 MKNK2Q9HBH9 465 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 CRTAC1Q9NQ79 661 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ZNF277Q9NRM2 450 aaPredicted RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 SEL1LQ9UBV2 794 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 ABCF2Q9UG63 623 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 PCDHGB4Q9UN71 923 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 HDAC5Q9UQL6 1122 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 TMX2Q9Y320 296 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 FAM221AA4D161 298 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 STXBP3O00186 592 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 FFAR2O15552 330 aa3.99□□□□□ -1.77
XRN1-202ENST00000392981 SART1O43290 800 aaKnown RBP3.99□□□□□ -1.77
XRN1-202ENST00000392981 FAM200BP0CF97 657 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms