RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 AGO4Q9HCK5 861 aaKnown RBP13□□□□□ -0.33
IGHV4-28-201ENST00000390612 VPS54Q9P1Q0 977 aa13□□□□□ -0.33
IGHV4-28-201ENST00000390612 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 CPLX1O14810 134 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 DHX15O43143 795 aaKnown RBP12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 LGR5O75473 907 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 ATG7O95352 703 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 RFC2P35250 354 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 CHMP4BP1P59074 171 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 CPLX2Q6PUV4 134 aaKnown RBP12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 SERINC5Q86VE9 423 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 TRIM50Q86XT4 487 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 RASGRP4Q8TDF6 673 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 AFAP1L1Q8TED9 768 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 WNT8BQ93098 351 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 AIFM3Q96NN9 605 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 PCYT2Q99447 389 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 KIF2CQ99661 725 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 SLKQ9H2G2 1235 aaPredicted RBP12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 RNPEPQ9H4A4 650 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 MICAL3Q7RTP6 2002 aa12.99□□□□□ -0.33
IGHV4-28-201ENST00000390612 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 LARGE1O95461 756 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 FGBP02675 491 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 PFKMP08237 780 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 SMIM10L2AP0DMW4 78 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 SMIM10L2BP0DMW5 78 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 CKBP12277 381 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 TCF7P36402 384 aaPredicted RBP12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 NEK4P51957 841 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 ME3Q16798 604 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 GALNT17Q6IS24 598 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 LENG9Q96B70 501 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 JPH1Q9HDC5 661 aaPredicted RBP12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 MTMR10Q9NXD2 777 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 CXXC1Q9P0U4 656 aaPredicted RBP12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 SLC9A2Q9UBY0 812 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 PCDHA4Q9UN74 947 aa12.98□□□□□ -0.33
IGHV4-28-201ENST00000390612 SIP14410 1827 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 EMSYQ7Z589 1322 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 IGKV6D-21A0A0A0MT36 114 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 CXCL10P02778 98 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 FDPSP14324 419 aaKnown RBP12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 SELPP16109 830 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 USP11P51784 963 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 NLRP5P59047 1200 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 ACTR2P61160 394 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 SP4Q02446 784 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 UTP14CQ5TAP6 766 aaKnown RBP12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 Q7L0L9 218 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 PLA2G4DQ86XP0 818 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 DEFB123Q8N688 67 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 CCDC155Q8N6L0 562 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 RETREG2Q8NC44 543 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 GTF3C6Q969F1 213 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 PKD2L1Q9P0L9 805 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 NOD1Q9Y239 953 aa12.97□□□□□ -0.33
IGHV4-28-201ENST00000390612 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 C17orf102A2RUQ5 167 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 TREHO43280 583 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 CDKL5O76039 1030 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 PARNO95453 639 aaKnown RBP12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 CCNE2O96020 404 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 CYP3A7P24462 503 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 ZNF76P36508 570 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 ST3GAL1Q11201 340 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 ABHD15Q6UXT9 468 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 BLIDQ8IZY5 108 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 NECAB1Q8N987 351 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 ATP6V0A1Q93050 837 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 SDF4Q9BRK5 362 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 SMARCAD1Q9H4L7 1026 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 SETD4Q9NVD3 440 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 ERAP1Q9NZ08 941 aa12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 ZNF215Q9UL58 517 aaPredicted RBP12.96□□□□□ -0.33
IGHV4-28-201ENST00000390612 REV3LO60673 3130 aa12.96□□□□□ -0.34
IGHV4-28-201ENST00000390612 NRCAMQ92823 1304 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 TMEM265A0A087WTH1 108 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 MBLAC1A4D2B0 266 aaPredicted RBP12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 NBNO60934 754 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 GNAT1P11488 350 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 RBM25P49756 843 aaKnown RBP12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 SETQ01105 290 aaPredicted RBP12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 MARCH8Q5T0T0 291 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZNF618Q5T7W0 954 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 LRRC8DQ7L1W4 858 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 OTOP2Q7RTS6 562 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 PLPPR4Q7Z2D5 763 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 DEFB128Q7Z7B8 93 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 RPAINQ86UA6 219 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 NSUN7Q8NE18 718 aaKnown RBP12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 LMBR1Q8WVP7 490 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 MBOAT7Q96N66 472 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 C22orf23Q9BZE7 217 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms