RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 FKBP15Q5T1M5 1219 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 RNF187Q5TA31 235 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 DCAF12L1Q5VU92 463 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ANO7Q6IWH7 933 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC70Q6NSX1 233 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CGB2Q6NT52 195 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 NFXL1Q6ZNB6 911 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 DDX42Q86XP3 938 aaKnown RBP eCLIP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SPNS2Q8IVW8 549 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 IFNL2Q8IZJ0 200 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SPICE1Q8N0Z3 855 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SYNE4Q8N205 404 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 STAG2Q8N3U4 1231 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 METTL13Q8N6R0 699 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CCHCR1Q8TD31 782 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ZFAND2BQ8WV99 257 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SYN2Q92777 582 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC47Q96A33 483 aaKnown RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PBKQ96KB5 322 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TRIM47Q96LD4 638 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PSMB7Q99436 277 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 KRT12Q99456 494 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ZKSCAN3Q9BRR0 538 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SYT11Q9BT88 431 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TMEM109Q9BVC6 243 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PACSIN1Q9BY11 444 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 NAPBQ9H115 298 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 CUEDC2Q9H467 287 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 GREM2Q9H772 168 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 MAGEF1Q9HAY2 307 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ARHGEF10LQ9HCE6 1279 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 JADE2Q9NQC1 790 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 HOMER3Q9NSC5 361 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 BLOC1S4Q9NUP1 217 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PANK4Q9NVE7 773 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ETAA1Q9NY74 926 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 ADAM22Q9P0K1 906 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 BCCIPQ9P287 314 aaKnown RBP eCLIP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PRKAG3Q9UGI9 489 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 TTC7AQ9ULT0 858 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 L3MBTL1Q9Y468 752 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 PCDHA3Q9Y5H8 950 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 SCN4AP35499 1836 aa3.79□□□□□ -1.8
TRAV39-201ENST00000390466 COL5A2P05997 1499 aaPredicted RBP3.79□□□□□ -1.8
TRAV39-201ENST00000390466 LTBP1Q14766 1721 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 ROBO3Q96MS0 1386 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 MROH7Q68CQ1 1323 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 RPTORQ8N122 1335 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 DOCK5Q9H7D0 1870 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 A0A087X0T9 212 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 GOLGA6L7A0A1B0GV03 622 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 FRMD3A2A2Y4 597 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SIGLEC16A6NMB1 481 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 GCOM1H8Y6P7 765 aaPredicted RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 ABLIM1O14639 778 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 TP73O15350 636 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 BUB1O43683 1085 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SNX3O60493 162 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 USO1O60763 962 aaKnown RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 CAND2O75155 1236 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 PALMO75781 387 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 IDH1O75874 414 aaKnown RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SNUPNO95149 360 aaKnown RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 PDE8BO95263 885 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 GJB6O95452 261 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 NPTXRO95502 500 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 ANP32DO95626 131 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SSBP05455 408 aaKnown RBP eCLIP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 KRT16P08779 473 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 UQCRFS1P1P0C7P4 283 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 FAM228BP0C875 321 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 MYZAPP0CAP1 466 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SCG2P13521 617 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 ITGA4P13612 1032 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 CCNB1P14635 433 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 GM2AP17900 193 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 PLCG1P19174 1290 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 CDC25CP30307 473 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 HPDP32754 393 aaPredicted RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 PRKCIP41743 596 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 STAT6P42226 847 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 PTGIRP43119 386 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 CTSWP56202 376 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 RWDD2BP57060 319 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 MAGOHP61326 146 aaKnown RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SETQ01105 290 aaPredicted RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 GRB10Q13322 594 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 BIRC2Q13490 618 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 NAA25Q14CX7 972 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SPA17Q15506 151 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 KIAA0753Q2KHM9 967 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 CCDC96Q2M329 555 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 SGSM1Q2NKQ1 1148 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 TBC1D25Q3MII6 688 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 TMEM119Q4V9L6 283 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 ZC3H12AQ5D1E8 599 aaKnown RBP3.78□□□□□ -1.8
TRAV39-201ENST00000390466 FOXB2Q5VYV0 432 aa3.78□□□□□ -1.8
TRAV39-201ENST00000390466 DUPD1Q68J44 220 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms