RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 SETD4Q9NVD3 440 aa20.8■□□□□ 0.92
CD9-204ENST00000382519 MAFGO15525 162 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 PRPF3O43395 683 aaKnown RBP20.79■□□□□ 0.92
CD9-204ENST00000382519 CXCL10P02778 98 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 GNAT1P11488 350 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 HOXC8P31273 242 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 ZNF76P36508 570 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 SREBF1P36956 1147 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 CLK2P49760 499 aaKnown RBP20.79■□□□□ 0.92
CD9-204ENST00000382519 ARHGAP4P98171 946 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 GPNMBQ14956 572 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 CNKSR3Q6P9H4 555 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 CYP2W1Q8TAV3 490 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 GLG1Q92896 1179 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 GAS2L1Q99501 681 aaPredicted RBP20.79■□□□□ 0.92
CD9-204ENST00000382519 SDF4Q9BRK5 362 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 SLC26A6Q9BXS9 759 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 UPF3BQ9BZI7 483 aaKnown RBP20.79■□□□□ 0.92
CD9-204ENST00000382519 C6orf50Q9HD87 102 aa20.79■□□□□ 0.92
CD9-204ENST00000382519 GSTTP1A0A1W2PQM5 241 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 ESYT2A0FGR8 921 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 CTSHP09668 335 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 MARK3P27448 753 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 PDIA3P30101 505 aaKnown RBP20.78■□□□□ 0.92
CD9-204ENST00000382519 TOB2Q14106 344 aaPredicted RBP20.78■□□□□ 0.92
CD9-204ENST00000382519 PKN1Q16512 942 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 CEP55Q53EZ4 464 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 TRAF7Q6Q0C0 670 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 LMBR1Q8WVP7 490 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 RNF26Q9BY78 433 aaPredicted RBP20.78■□□□□ 0.92
CD9-204ENST00000382519 SLC9A2Q9UBY0 812 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 MICAL3Q7RTP6 2002 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 EMSYQ7Z589 1322 aa20.78■□□□□ 0.92
CD9-204ENST00000382519 RSPH10B2B2RC85 870 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 CENPBP07199 599 aaPredicted RBP20.77■□□□□ 0.92
CD9-204ENST00000382519 RSPH10BP0C881 870 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 ARP10275 920 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 WDR5P61964 334 aaKnown RBP20.77■□□□□ 0.92
CD9-204ENST00000382519 MBTPS1Q14703 1052 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 NTRK3Q16288 839 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 HERC6Q8IVU3 1022 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 REXO1Q8N1G1 1221 aaKnown RBP20.77■□□□□ 0.92
CD9-204ENST00000382519 PHOSPHO2Q8TCD6 241 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 ZMYND12Q9H0C1 365 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 ERAP1Q9NZ08 941 aa20.77■□□□□ 0.92
CD9-204ENST00000382519 CHD9Q3L8U1 2897 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 RBAK-RBAKDNI3L0D1 243 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 CA3P07451 260 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 IFNAR1P17181 557 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 EVCP57679 992 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 PPFIA1Q13136 1202 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 TCTN1Q2MV58 587 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.76■□□□□ 0.91
CD9-204ENST00000382519 CCDC148Q8NFR7 591 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 TM6SF1Q9BZW5 370 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 SMARCAD1Q9H4L7 1026 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 AGO4Q9HCK5 861 aaKnown RBP20.76■□□□□ 0.91
CD9-204ENST00000382519 NFASCO94856 1347 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
CD9-204ENST00000382519 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 LGR5O75473 907 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 GNA11P29992 359 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 IKBKEQ14164 716 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 TRIM22Q8IYM9 498 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 LARP6Q9BRS8 491 aaKnown RBP20.75■□□□□ 0.91
CD9-204ENST00000382519 AZI2Q9H6S1 392 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 PDRG1Q9NUG6 133 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 VPS54Q9P1Q0 977 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 SIP14410 1827 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 CDH23Q9H251 3354 aa20.75■□□□□ 0.91
CD9-204ENST00000382519 ABHD14A-ACY1A0A1B0GW23 586 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 DDX39AO00148 427 aaKnown RBP20.74■□□□□ 0.91
CD9-204ENST00000382519 MEIS1O00470 390 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 CPLX1O14810 134 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 ADAMTS3O15072 1205 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 CAND2O75155 1236 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 ACTR2P61160 394 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 DEFB103AP81534 67 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 STK3Q13188 491 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 ITGB3BPQ13352 177 aaPredicted RBP20.74■□□□□ 0.91
CD9-204ENST00000382519 GRIK4Q16099 956 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 MCTP2Q6DN12 878 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 TMCO2Q7Z6W1 182 aaPredicted RBP20.74■□□□□ 0.91
CD9-204ENST00000382519 PLA2G4DQ86XP0 818 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 ZBED2Q9BTP6 218 aa20.74■□□□□ 0.91
CD9-204ENST00000382519 FAM86B1E9PN63 330 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 TLL1O43897 1013 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 EFCAB14O75071 495 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 FAM86B2P0C5J1 330 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 IGFBP4P22692 258 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 IGBP1P78318 339 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 ADAM17P78536 824 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 NIPA1Q7RTP0 329 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 BICD2Q8TD16 824 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 RASGRP4Q8TDF6 673 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 TUBE1Q9UJT0 475 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 TRPC6Q9Y210 931 aa20.73■□□□□ 0.91
CD9-204ENST00000382519 CYP3A4P08684 503 aa20.72■□□□□ 0.91
CD9-204ENST00000382519 SSRP1Q08945 709 aaKnown RBP20.72■□□□□ 0.91
CD9-204ENST00000382519 RUFY4Q6ZNE9 571 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms