RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FANCBQ8NB91 859 aa19.38■□□□□ 0.69
SMN2-201ENST00000380741 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
SMN2-201ENST00000380741 GPRASP2Q96D09 838 aa19.38■□□□□ 0.69
SMN2-201ENST00000380741 NECAB3Q96P71 396 aaPredicted RBP19.38■□□□□ 0.69
SMN2-201ENST00000380741 TGS1Q96RS0 853 aaKnown RBP19.38■□□□□ 0.69
SMN2-201ENST00000380741 AMHP03971 560 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 KCNA2P16389 499 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 ITGB5P18084 799 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 ERVK-21P61565 698 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 ADAM17P78536 824 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 ARHGAP4P98171 946 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 SGMS1Q86VZ5 419 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 GIMAP8Q8ND71 665 aaPredicted RBP19.37■□□□□ 0.69
SMN2-201ENST00000380741 SUGCTQ9HAC7 445 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 COG5Q9UP83 839 aa19.37■□□□□ 0.69
SMN2-201ENST00000380741 TCF7P36402 384 aaPredicted RBP19.36■□□□□ 0.69
SMN2-201ENST00000380741 HEATR3Q7Z4Q2 680 aa19.36■□□□□ 0.69
SMN2-201ENST00000380741 SEPT8Q92599 483 aa19.36■□□□□ 0.69
SMN2-201ENST00000380741 CDHR1Q96JP9 859 aa19.36■□□□□ 0.69
SMN2-201ENST00000380741 LMCD1Q9NZU5 365 aa19.36■□□□□ 0.69
SMN2-201ENST00000380741 INSL6Q9Y581 213 aa19.36■□□□□ 0.69
SMN2-201ENST00000380741 NRCAMQ92823 1304 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 SPDYE3A6NKU9 549 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 HTRA4P83105 476 aaPredicted RBP19.35■□□□□ 0.69
SMN2-201ENST00000380741 MTMR1Q13613 665 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 BMP2KLQ5H9B9 411 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 HLA-CQ95604 372 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 PKD2L1Q9P0L9 805 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 UBIAD1Q9Y5Z9 338 aa19.35■□□□□ 0.69
SMN2-201ENST00000380741 CNTNAP5Q8WYK1 1306 aa19.34■□□□□ 0.69
SMN2-201ENST00000380741 GSTTP1A0A1W2PQM5 241 aa19.34■□□□□ 0.69
SMN2-201ENST00000380741 SP7Q8TDD2 431 aaPredicted RBP19.34■□□□□ 0.69
SMN2-201ENST00000380741 C17orf80Q9BSJ5 609 aa19.34■□□□□ 0.69
SMN2-201ENST00000380741 NLRC5Q86WI3 1866 aa19.34■□□□□ 0.69
SMN2-201ENST00000380741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.33■□□□□ 0.68
SMN2-201ENST00000380741 MARK3P27448 753 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 FAM26DQ5JW98 314 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 RNF20Q5VTR2 975 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 APOA5Q6Q788 366 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 SYNE3Q6ZMZ3 975 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 RUFY4Q6ZNE9 571 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 SEPT1Q8WYJ6 367 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 TOP1MTQ969P6 601 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 TCEANC2Q96MN5 208 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 NEK1Q96PY6 1258 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 JADE2Q9NQC1 790 aa19.33■□□□□ 0.68
SMN2-201ENST00000380741 UPP2O95045 317 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 CHRNA1P02708 482 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 PPFIA1Q13136 1202 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 TYW1BQ6NUM6 668 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 FBXO22Q8NEZ5 403 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 APBB2Q92870 758 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 IFIH1Q9BYX4 1025 aaKnown RBP19.32■□□□□ 0.68
SMN2-201ENST00000380741 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
SMN2-201ENST00000380741 ERAP1Q9NZ08 941 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 COL4A6Q14031 1691 aa19.32■□□□□ 0.68
SMN2-201ENST00000380741 EXOSC10Q01780 885 aaKnown RBP19.31■□□□□ 0.68
SMN2-201ENST00000380741 GRIK4Q16099 956 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 TAF2Q6P1X5 1199 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 GLG1Q92896 1179 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 YME1L1Q96TA2 773 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 TUBE1Q9UJT0 475 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 BRPF3Q9ULD4 1205 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 RALGAPA2Q2PPJ7 1873 aa19.31■□□□□ 0.68
SMN2-201ENST00000380741 MAFGO15525 162 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 GHRP10912 638 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 NAPAP54920 295 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 FUT2Q10981 343 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 RTN1Q16799 776 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 ADCK5Q3MIX3 580 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 CENPQQ7L2Z9 268 aaPredicted RBP19.3■□□□□ 0.68
SMN2-201ENST00000380741 DHX32Q7L7V1 743 aaKnown RBP19.3■□□□□ 0.68
SMN2-201ENST00000380741 RPAINQ86UA6 219 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 CYP2W1Q8TAV3 490 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 PGBD1Q96JS3 809 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 SMARCAD1Q9H4L7 1026 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 EHMT1Q9H9B1 1298 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 JPH1Q9HDC5 661 aaPredicted RBP19.3■□□□□ 0.68
SMN2-201ENST00000380741 KCNH7Q9NS40 1196 aa19.3■□□□□ 0.68
SMN2-201ENST00000380741 MBLAC1A4D2B0 266 aaPredicted RBP19.29■□□□□ 0.68
SMN2-201ENST00000380741 ZBTB43O43298 467 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 MGAT3Q09327 533 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 EPC2Q52LR7 807 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 MARCH8Q5T0T0 291 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 PPP1R18Q6NYC8 613 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 PCYT2Q99447 389 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 MXRA8Q9BRK3 442 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 RIC8AQ9NPQ8 531 aa19.29■□□□□ 0.68
SMN2-201ENST00000380741 LOXHD1Q8IVV2 1947 aa19.28■□□□□ 0.68
SMN2-201ENST00000380741 IGBP1P78318 339 aa19.28■□□□□ 0.68
SMN2-201ENST00000380741 LPIN1Q14693 890 aa19.28■□□□□ 0.68
SMN2-201ENST00000380741 TSGA10IPQ3SY00 556 aa19.28■□□□□ 0.68
SMN2-201ENST00000380741 RSPH3Q86UC2 560 aa19.28■□□□□ 0.68
SMN2-201ENST00000380741 DNAJB3Q8WWF6 145 aa19.28■□□□□ 0.68
SMN2-201ENST00000380741 SAMD11Q96NU1 681 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms