RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 SERPING1P05155 500 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 CRKP46108 304 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 USP11P51784 963 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 SLFN13Q68D06 897 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 FOXR1Q6PIV2 292 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
RFC3-201ENST00000380071 TBC1D5Q92609 795 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 POLD4Q9HCU8 107 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 CYP3A7-CYP3A51PA0A087WV96 503 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 G3V3G9 751 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 KRT18P05783 430 aaKnown RBP13.4□□□□□ -0.26
RFC3-201ENST00000380071 CYP3A7P24462 503 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
RFC3-201ENST00000380071 PRR16Q569H4 304 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 DCAF8Q5TAQ9 597 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 CCDC181Q5TID7 509 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 BCAS3Q9H6U6 928 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
RFC3-201ENST00000380071 LRRC37AA6NMS7 1700 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 KLRC1P26715 233 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 DNA2P51530 1060 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 ITIH3Q06033 890 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 SPIRE1Q08AE8 756 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 KCNH2Q12809 1159 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 CERKLQ49MI3 558 aaPredicted RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 CCDC70Q6NSX1 233 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 LEKR1Q6ZMV7 388 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 KIAA0825Q8IV33 1275 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 FAM133AQ8N9E0 248 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.39□□□□□ -0.27
RFC3-201ENST00000380071 DHX36Q9H2U1 1008 aaKnown RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 RBM12Q9NTZ6 932 aaKnown RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 ADAMTS1Q9UHI8 967 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 LCMT1Q9UIC8 334 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 FAM184BQ9ULE4 1060 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 GREB1LQ9C091 1923 aaPredicted RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 A0A087X0T9 212 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 FRMD3A2A2Y4 597 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 PALMO75781 387 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 GNA14O95837 355 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 FAM228BP0C875 321 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 ACTN1P12814 892 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 ARHGAP4P98171 946 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 PABPC4Q13310 644 aaKnown RBP eCLIP13.39□□□□□ -0.278e-8■□□□□ 10.9
RFC3-201ENST00000380071 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 GIT2Q14161 759 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 HAUS3Q68CZ6 603 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 SND1Q7KZF4 910 aaKnown RBP eCLIP13.39□□□□□ -0.27
RFC3-201ENST00000380071 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 ETNPPLQ8TBG4 499 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 MKL1Q969V6 931 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 MBOAT7Q96N66 472 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
RFC3-201ENST00000380071 PACSIN1Q9BY11 444 aa13.39□□□□□ -0.27
RFC3-201ENST00000380071 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
RFC3-201ENST00000380071 FTCDO95954 541 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 SPATA31C1P0DKV0 1188 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 HOXD13P35453 343 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 PAFAH1B1P43034 410 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 USH1GQ495M9 461 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 AFAP1L1Q8TED9 768 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 CRYGNQ8WXF5 182 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
RFC3-201ENST00000380071 TRIM34Q9BYJ4 488 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
RFC3-201ENST00000380071 EHD4Q9H223 541 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 PLEKHA4Q9H4M7 779 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 PACSIN2Q9UNF0 486 aaPredicted RBP13.38□□□□□ -0.27
RFC3-201ENST00000380071 QSER1Q2KHR3 1735 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 SLC9A1P19634 815 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 NR2F2P24468 414 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 SLC18A3Q16572 532 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 MEX3CQ5U5Q3 659 aaKnown RBP13.38□□□□□ -0.27
RFC3-201ENST00000380071 LRRC31Q6UY01 552 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 ARHGAP27Q6ZUM4 889 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 DNAAF5Q86Y56 855 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 ZC3H3Q8IXZ2 948 aaKnown RBP13.38□□□□□ -0.27
RFC3-201ENST00000380071 SLFN12Q8IYM2 578 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 GANQ9H2C0 597 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 NYAP2Q9P242 653 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
RFC3-201ENST00000380071 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 CETN3O15182 167 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 TRIM37O94972 964 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 GDF11O95390 407 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 RBM5P52756 815 aaKnown RBP eCLIP13.37□□□□□ -0.27
RFC3-201ENST00000380071 KLHL30Q0D2K2 578 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 NAB2Q15742 525 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 SLC27A3Q5K4L6 730 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 CYP2W1Q8TAV3 490 aa13.37□□□□□ -0.27
RFC3-201ENST00000380071 LENG9Q96B70 501 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms