RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SLC26A6Q9BXS9 759 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 ZSWIM6Q9HCJ5 1215 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 SETD4Q9NVD3 440 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 YBX2Q9Y2T7 364 aaKnown RBP28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 EMSYQ7Z589 1322 aa28.15■■■□□ 2.1
TNFRSF4-201ENST00000379236 TREHO43280 583 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 CCT2P78371 535 aaKnown RBP28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 ARHGAP4P98171 946 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 HIC1Q14526 733 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 TRIM71Q2Q1W2 868 aaKnown RBP28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 CEP55Q53EZ4 464 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 CCDC148Q8NFR7 591 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 WNT8BQ93098 351 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 KCNH7Q9NS40 1196 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 ERAP1Q9NZ08 941 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 TELO2Q9Y4R8 837 aa28.14■■■□□ 2.1
TNFRSF4-201ENST00000379236 RSPH10B2B2RC85 870 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 NBNO60934 754 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 RSPH10BP0C881 870 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 GNA11P29992 359 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 SREBF1P36956 1147 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 CLK2P49760 499 aaKnown RBP28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 REXO1Q8N1G1 1221 aaKnown RBP28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 RNF26Q9BY78 433 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 SMARCAD1Q9H4L7 1026 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 PRDM12Q9H4Q4 367 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 SLC9A2Q9UBY0 812 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 NRCAMQ92823 1304 aa28.13■■■□□ 2.09
TNFRSF4-201ENST00000379236 ESYT2A0FGR8 921 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 CXCL10P02778 98 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 PDIA3P30101 505 aaKnown RBP28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 HOXC8P31273 242 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 IKBKEQ14164 716 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 TRIM22Q8IYM9 498 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 BICD2Q8TD16 824 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 TM6SF1Q9BZW5 370 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 ZMYND12Q9H0C1 365 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 AZI2Q9H6S1 392 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 MICAL3Q7RTP6 2002 aa28.12■■■□□ 2.09
TNFRSF4-201ENST00000379236 GSTTP1A0A1W2PQM5 241 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 CPLX1O14810 134 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 EFCAB14O75071 495 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 CAND2O75155 1236 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 MYOGP15173 224 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 IFNAR1P17181 557 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 MARK3P27448 753 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 HERC6Q8IVU3 1022 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 NCOA5Q9HCD5 579 aaKnown RBP28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 NFASCO94856 1347 aa28.11■■■□□ 2.09
TNFRSF4-201ENST00000379236 ABHD14A-ACY1A0A1B0GW23 586 aa28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 WDR5P61964 334 aaKnown RBP28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 PPFIA1Q13136 1202 aa28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 TOB2Q14106 344 aaPredicted RBP28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 PKN1Q16512 942 aa28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 CPLX2Q6PUV4 134 aaKnown RBP28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 CYP2W1Q8TAV3 490 aa28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 LMBR1Q8WVP7 490 aa28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 TNPO1Q92973 898 aaKnown RBP28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 ZBED2Q9BTP6 218 aa28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 UPF3BQ9BZI7 483 aaKnown RBP28.1■■■□□ 2.09
TNFRSF4-201ENST00000379236 EYSQ5T1H1 3165 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 PPFIA3O75145 1194 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 LGR5O75473 907 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 CA3P07451 260 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 CTSHP09668 335 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 ARP10275 920 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 EVCP57679 992 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 GPNMBQ14956 572 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 AGO4Q9HCK5 861 aaKnown RBP28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 PDRG1Q9NUG6 133 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 CHD9Q3L8U1 2897 aa28.09■■■□□ 2.09
TNFRSF4-201ENST00000379236 TLL1O43897 1013 aa28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 SSRP1Q08945 709 aaKnown RBP28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 NTRK3Q16288 839 aa28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 TRAF7Q6Q0C0 670 aa28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 NIPA1Q7RTP0 329 aa28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 PLA2G4DQ86XP0 818 aa28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 MYH9P35579 1960 aaKnown RBP28.08■■■□□ 2.09
TNFRSF4-201ENST00000379236 MEIS1O00470 390 aa28.07■■■□□ 2.08
TNFRSF4-201ENST00000379236 IGFBP4P22692 258 aa28.07■■■□□ 2.08
TNFRSF4-201ENST00000379236 GRIK4Q16099 956 aa28.07■■■□□ 2.08
TNFRSF4-201ENST00000379236 RSPH3Q86UC2 560 aa28.07■■■□□ 2.08
TNFRSF4-201ENST00000379236 ZNF274Q96GC6 653 aaPredicted RBP28.07■■■□□ 2.08
TNFRSF4-201ENST00000379236 TCEAL9Q9UHQ7 104 aa28.07■■■□□ 2.08
TNFRSF4-201ENST00000379236 DDX39AO00148 427 aaKnown RBP28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 ACTR2P61160 394 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 STK3Q13188 491 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 MBTPS1Q14703 1052 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 TAF2Q6P1X5 1199 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 VPS54Q9P1Q0 977 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 TUBE1Q9UJT0 475 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 TRPC6Q9Y210 931 aa28.06■■■□□ 2.08
TNFRSF4-201ENST00000379236 EIF5BO60841 1220 aaKnown RBP28.05■■■□□ 2.08
TNFRSF4-201ENST00000379236 NLRP5P59047 1200 aa28.05■■■□□ 2.08
TNFRSF4-201ENST00000379236 IGBP1P78318 339 aa28.05■■■□□ 2.08
TNFRSF4-201ENST00000379236 SETQ01105 290 aaPredicted RBP28.05■■■□□ 2.08
TNFRSF4-201ENST00000379236 SEPT8Q92599 483 aa28.05■■■□□ 2.08
TNFRSF4-201ENST00000379236 LARP6Q9BRS8 491 aaKnown RBP28.05■■■□□ 2.08
TNFRSF4-201ENST00000379236 SIP14410 1827 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms