RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CYTH3O43739 400 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 MARK3P27448 753 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 SMARCC2Q8TAQ2 1214 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 INPP4AQ96PE3 977 aaPredicted RBP20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 ADGRA3Q8IWK6 1321 aa20.53■□□□□ 0.88
PDLIM4-202ENST00000379018 CHRNA1P02708 482 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 ICAM3P32942 547 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 GTF2F1P35269 517 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 MRE11P49959 708 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 NUCB1Q02818 461 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 DLX2Q07687 328 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 ADHFE1Q8IWW8 467 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 C11orf84Q9BUA3 381 aaPredicted RBP20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 OSBPL3Q9H4L5 887 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 PKD2L1Q9P0L9 805 aa20.52■□□□□ 0.88
PDLIM4-202ENST00000379018 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 IGHDP01880 384 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 IBSPP21815 317 aaPredicted RBP20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 IRS1P35568 1242 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 BMPR1AP36894 532 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 LTBRP36941 435 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 HYAL1Q12794 435 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 BTG3Q14201 252 aaPredicted RBP20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 WTAPQ15007 396 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 USP17L6PQ6QN14 398 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 CUL5Q93034 780 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 FBXL18Q96ME1 805 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 PRKAG3Q9UGI9 489 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 MUTYHQ9UIF7 546 aa20.51■□□□□ 0.87
PDLIM4-202ENST00000379018 C5orf42Q9H799 3197 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 STAM2O75886 525 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 IGBP1P78318 339 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 NHLH1Q02575 133 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 PPFIA1Q13136 1202 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 FAM26DQ5JW98 314 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 HFE2Q6ZVN8 426 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 RALYLQ86SE5 291 aaKnown RBP20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 ALG13Q9NP73 1137 aaKnown RBP20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 FRMPD4Q14CM0 1322 aa20.5■□□□□ 0.87
PDLIM4-202ENST00000379018 POTEB3A0JP26 581 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 LINC01565O15544 149 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 TCF7P36402 384 aaPredicted RBP20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 ADAM17P78536 824 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 LPIN1Q14693 890 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 POTEBQ6S5H4 581 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 CATIPQ7Z7H3 387 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 DNAJB3Q8WWF6 145 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 MYL10Q9BUA6 226 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 UPF3BQ9BZI7 483 aaKnown RBP20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 RWDD3Q9Y3V2 267 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 NRCAMQ92823 1304 aa20.49■□□□□ 0.87
PDLIM4-202ENST00000379018 C19orf67A6NJJ6 358 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 C5orf67F2Z3F1 127 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 MBTPS2O43462 519 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 NCK2O43639 380 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 TBX10O75333 385 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 RB1P06400 928 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 COL19A1Q14993 1142 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 SART3Q15020 963 aaKnown RBP20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 GRIK4Q16099 956 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 RSPH3Q86UC2 560 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 NLRX1Q86UT6 975 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 ZBTB10Q96DT7 871 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 FAM49AQ9H0Q0 323 aaPredicted RBP20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 LMAN2LQ9H0V9 348 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 TUBE1Q9UJT0 475 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 CDY2AQ9Y6F7 541 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 TAF6LQ9Y6J9 622 aa20.48■□□□□ 0.87
PDLIM4-202ENST00000379018 ENPP3O14638 875 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 CYP21A2P08686 494 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 LINC00271P0C7V0 271 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 NDUFV1P49821 464 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 SMAD2Q15796 467 aaKnown RBP20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 PAN2Q504Q3 1202 aaKnown RBP20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 TAF2Q6P1X5 1199 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 GLG1Q92896 1179 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 RRP36Q96EU6 259 aaKnown RBP20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 POP1Q99575 1024 aaKnown RBP20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 EHMT1Q9H9B1 1298 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 CD207Q9UJ71 328 aa20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 U3KPZ7 1027 aaPredicted RBP20.47■□□□□ 0.87
PDLIM4-202ENST00000379018 TTC3P53804 2025 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 STXBP3O00186 592 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 ATP9AO75110 1047 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 PTH1RQ03431 593 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 MGAT3Q09327 533 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 TROAPQ12815 778 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 SMAD4Q13485 552 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 CTC1Q2NKJ3 1217 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 FBXO47Q5MNV8 452 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 NCOA7Q8NI08 942 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 SENP7Q9BQF6 1050 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 RC3H2Q9HBD1 1191 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 KIAA1671Q9BY89 1806 aa20.46■□□□□ 0.87
PDLIM4-202ENST00000379018 MMP1P03956 469 aa20.45■□□□□ 0.86
PDLIM4-202ENST00000379018 CD52P31358 61 aa20.45■□□□□ 0.86
PDLIM4-202ENST00000379018 TMEM62Q0P6H9 643 aa20.45■□□□□ 0.86
PDLIM4-202ENST00000379018 RNF135Q8IUD6 432 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms