RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MFAP3LO75121 409 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 GUF1Q8N442 669 aaKnown RBP15.88■□□□□ 0.13
TCOF1-202ENST00000377797 RGL1Q9NZL6 768 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 ABCC6O95255 1503 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 SHTN1A0MZ66 631 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 MYZAPP0CAP1 466 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 RPS12P25398 132 aaKnown RBP15.88■□□□□ 0.13
TCOF1-202ENST00000377797 TMOD1P28289 359 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 KCNB1Q14721 858 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 STXBP2Q15833 593 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 PADI6Q6TGC4 694 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 C15orf52Q6ZUT6 534 aaKnown RBP15.88■□□□□ 0.13
TCOF1-202ENST00000377797 NAP1L3Q99457 506 aaPredicted RBP15.88■□□□□ 0.13
TCOF1-202ENST00000377797 EIF2AK1Q9BQI3 630 aaKnown RBP15.88■□□□□ 0.13
TCOF1-202ENST00000377797 ACTN4O43707 911 aaKnown RBP15.88■□□□□ 0.13
TCOF1-202ENST00000377797 FMR1Q06787 632 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■■■□ 20.4
TCOF1-202ENST00000377797 DPYDQ12882 1025 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 SLC35F6Q8N357 371 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 HPS3Q969F9 1004 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 EHD4Q9H223 541 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
TCOF1-202ENST00000377797 INO80B-WBP1J3KQ70 363 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 ECE1P42892 770 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 JAK3P52333 1124 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 CFAP221Q4G0U5 840 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 SYCE1Q8N0S2 351 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 UBL4BQ8N7F7 174 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 INO80BQ9C086 356 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-202ENST00000377797 MTFR1LQ9H019 292 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 FBXO28Q9NVF7 368 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 ZNF142P52746 1687 aaPredicted RBP15.87■□□□□ 0.13
TCOF1-202ENST00000377797 KRT76Q01546 638 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 RASSF7Q02833 373 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 PTPROQ16827 1216 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 CCDC26Q8TAB7 109 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 LMAN1P49257 510 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 DACT2Q5SW24 774 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 APOBEC3HQ6NTF7 200 aaKnown RBP15.87■□□□□ 0.13
TCOF1-202ENST00000377797 DPF2Q92785 391 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 GCNT4Q9P109 453 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 P4HBP07237 508 aaKnown RBP15.87■□□□□ 0.13
TCOF1-202ENST00000377797 CYP27A1Q02318 531 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 COG2Q14746 738 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 CRY2Q49AN0 593 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 ACAD9Q9H845 621 aa15.87■□□□□ 0.13
TCOF1-202ENST00000377797 QARSP47897 775 aaKnown RBP15.86■□□□□ 0.13
TCOF1-202ENST00000377797 DAGLBQ8NCG7 672 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 ZNF280CQ8ND82 737 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 DISP2A7MBM2 1401 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 SHMT1P34896 483 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 DCUN1D2Q6PH85 259 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 KLHL7Q8IXQ5 586 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 LXNQ9BS40 222 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 NDUFA10O95299 355 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 TGFB2P61812 414 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 PPP1R7Q15435 360 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 PROM2Q8N271 834 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 JPH2Q9BR39 696 aaPredicted RBP15.86■□□□□ 0.13
TCOF1-202ENST00000377797 ADPGKQ9BRR6 497 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 BZW2Q9Y6E2 419 aaKnown RBP15.86■□□□□ 0.13
TCOF1-202ENST00000377797 LRRN2O75325 713 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 RASGRP2Q7LDG7 609 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 DAAM2Q86T65 1068 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 PNMA3Q9UL41 463 aa15.86■□□□□ 0.13
TCOF1-202ENST00000377797 TMEM191BP0C7N4 346 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 SEMA3FQ13275 785 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 WHAMMP3Q1A5X7 153 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 FAM47CQ5HY64 1035 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 NEK9Q8TD19 979 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 NT5C1BQ96P26 610 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 FERMT1Q9BQL6 677 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 SPC25Q9HBM1 224 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 SPTLC3Q9NUV7 552 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 EIF4A3P38919 411 aaKnown RBP15.85■□□□□ 0.13
TCOF1-202ENST00000377797 RHBDL3P58872 404 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 NBPF9Q3BBW0 867 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 HACL1Q9UJ83 578 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 ENC1O14682 589 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 CAP2P40123 477 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 HDXQ7Z353 690 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 AMFRQ9UKV5 643 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 USTQ9Y2C2 406 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 PARP4Q9UKK3 1724 aaKnown RBP15.85■□□□□ 0.13
TCOF1-202ENST00000377797 FERP16591 822 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 BAATQ14032 418 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-202ENST00000377797 CCDC155Q8N6L0 562 aa15.85■□□□□ 0.13
TCOF1-202ENST00000377797 ZHX1Q9UKY1 873 aaPredicted RBP15.85■□□□□ 0.13
TCOF1-202ENST00000377797 MARK3P27448 753 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 MXI1P50539 228 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 STK4Q13043 487 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 CALCOCO2Q13137 446 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 HPSEQ9Y251 543 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 HYOU1Q9Y4L1 999 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 COL14A1Q05707 1796 aaKnown RBP15.84■□□□□ 0.13
TCOF1-202ENST00000377797 GOLGA8IPA6NC78 632 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 GOLGA8JA6NMD2 632 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 GTF2F1P35269 517 aaKnown RBP eCLIP15.84■□□□□ 0.13
TCOF1-202ENST00000377797 EPHA7Q15375 998 aa15.84■□□□□ 0.13
TCOF1-202ENST00000377797 KNOP1Q1ED39 458 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms