RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 CDKL5O76039 1030 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 DEXIO95424 95 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 CKBP12277 381 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 HOXC8P31273 242 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 CYP2W1Q8TAV3 490 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 LARP6Q9BRS8 491 aaKnown RBP19.17■□□□□ 0.66
HMGN4-201ENST00000377575 FTOQ9C0B1 505 aaKnown RBP eCLIP19.17■□□□□ 0.668e-9■□□□□ 8.1
HMGN4-201ENST00000377575 CXXC1Q9P0U4 656 aaPredicted RBP19.17■□□□□ 0.66
HMGN4-201ENST00000377575 VPS54Q9P1Q0 977 aa19.17■□□□□ 0.66
HMGN4-201ENST00000377575 MEIS1O00470 390 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 CYP3A4P08684 503 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 ZNF200P98182 395 aaPredicted RBP19.16■□□□□ 0.66
HMGN4-201ENST00000377575 SETQ01105 290 aaPredicted RBP19.16■□□□□ 0.66
HMGN4-201ENST00000377575 RAB30Q15771 203 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 SERINC5Q86VE9 423 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
HMGN4-201ENST00000377575 VWCEQ96DN2 955 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 IL17RAQ96F46 866 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 FAM161BQ96MY7 647 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 SLKQ9H2G2 1235 aaPredicted RBP19.16■□□□□ 0.66
HMGN4-201ENST00000377575 AGO4Q9HCK5 861 aaKnown RBP19.16■□□□□ 0.66
HMGN4-201ENST00000377575 ERAP1Q9NZ08 941 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 STXBP5LQ9Y2K9 1186 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 TELO2Q9Y4R8 837 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 SLC4A7Q9Y6M7 1214 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 EMSYQ7Z589 1322 aa19.16■□□□□ 0.66
HMGN4-201ENST00000377575 CDH23Q9H251 3354 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 NLRP5P59047 1200 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 CRYGNQ8WXF5 182 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 GLG1Q92896 1179 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 TIFAQ96CG3 184 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 PBX4Q9BYU1 374 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 SEMA6BQ9H3T3 888 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 RNPEPQ9H4A4 650 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 SMARCAD1Q9H4L7 1026 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 AZI2Q9H6S1 392 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 NRCAMQ92823 1304 aa19.15■□□□□ 0.66
HMGN4-201ENST00000377575 COL6A3P12111 3177 aa19.14■□□□□ 0.66
HMGN4-201ENST00000377575 GSTTP1A0A1W2PQM5 241 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 CAND2O75155 1236 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 BAIAP3O94812 1187 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 ARP10275 920 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 THPOP40225 353 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 SCRN1Q12765 414 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 HIC1Q14526 733 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 TRIM71Q2Q1W2 868 aaKnown RBP19.14■□□□□ 0.65
HMGN4-201ENST00000377575 PLA2G4DQ86XP0 818 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 RASGRP4Q8TDF6 673 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 GUCD1Q96NT3 240 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 TTYH1Q9H313 450 aaPredicted RBP19.14■□□□□ 0.65
HMGN4-201ENST00000377575 MSRAQ9UJ68 235 aa19.14■□□□□ 0.65
HMGN4-201ENST00000377575 MYH9P35579 1960 aaKnown RBP19.13■□□□□ 0.65
HMGN4-201ENST00000377575 GRXCR1A8MXD5 290 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 FAM86B1E9PN63 330 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 TREHO43280 583 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 PFKFB2O60825 505 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 FAM86B2P0C5J1 330 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 ATP2A2P16615 1042 aaKnown RBP19.13■□□□□ 0.65
HMGN4-201ENST00000377575 MARK3P27448 753 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 ACTR2P61160 394 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 ITGB3BPQ13352 177 aaPredicted RBP19.13■□□□□ 0.65
HMGN4-201ENST00000377575 ZNF618Q5T7W0 954 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 LMBR1Q8WVP7 490 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 WNT8BQ93098 351 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 SLC9A7Q96T83 725 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 C22orf23Q9BZE7 217 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 SETD4Q9NVD3 440 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 TPCN1Q9ULQ1 816 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 STK36Q9NRP7 1315 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 PTPRSQ13332 1948 aa19.13■□□□□ 0.65
HMGN4-201ENST00000377575 MICAL3Q7RTP6 2002 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 IGLV3-22A0A075B6J6 115 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 ADAMTS3O15072 1205 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 LGR5O75473 907 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 CXCL10P02778 98 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 AK2P54819 239 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 PPFIA1Q13136 1202 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 GALNT17Q6IS24 598 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 CNKSR3Q6P9H4 555 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 TNPO1Q92973 898 aaKnown RBP19.12■□□□□ 0.65
HMGN4-201ENST00000377575 TCEAL9Q9UHQ7 104 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 PCDHA4Q9UN74 947 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 WDR81Q562E7 1941 aa19.12■□□□□ 0.65
HMGN4-201ENST00000377575 RSPH10B2B2RC85 870 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 IPO5O00410 1097 aaKnown RBP19.11■□□□□ 0.65
HMGN4-201ENST00000377575 NBNO60934 754 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 RSPH10BP0C881 870 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 XBP1P17861 261 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 CIITAP33076 1130 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 PBX2P40425 430 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 KCNJ6P48051 423 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 DAGLBQ8NCG7 672 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 ZNF577Q9BSK1 485 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 ZNF576Q9H609 170 aa19.11■□□□□ 0.65
HMGN4-201ENST00000377575 SIP14410 1827 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
HMGN4-201ENST00000377575 EFCAB14O75071 495 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 ADAM17P78536 824 aa19.1■□□□□ 0.65
HMGN4-201ENST00000377575 GRIK4Q16099 956 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms