RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PPFIA1Q13136 1202 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 FAM26DQ5JW98 314 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 CENPQQ7L2Z9 268 aaPredicted RBP16.9■□□□□ 0.3
HDAC6-204ENST00000376643 FBXO22Q8NEZ5 403 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 LMBR1Q8WVP7 490 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 GLG1Q92896 1179 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 IFIH1Q9BYX4 1025 aaKnown RBP16.9■□□□□ 0.3
HDAC6-204ENST00000376643 AZI2Q9H6S1 392 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 RWDD3Q9Y3V2 267 aa16.9■□□□□ 0.3
HDAC6-204ENST00000376643 CHD7Q9P2D1 2997 aa16.89■□□□□ 0.3
HDAC6-204ENST00000376643 PRRC2BQ5JSZ5 2229 aaKnown RBP16.89■□□□□ 0.29
HDAC6-204ENST00000376643 RRN3P2A6NIE6 340 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 LPXNO60711 386 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 CTSHP09668 335 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 KCNA2P16389 499 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 RCAN1P53805 252 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 HIC1Q14526 733 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 FAM117BQ6P1L5 589 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 TRIM50Q86XT4 487 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 SP7Q8TDD2 431 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-204ENST00000376643 GDPD5Q8WTR4 605 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 TOP1MTQ969P6 601 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 NEK1Q96PY6 1258 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 C1QTNF1Q9BXJ1 281 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 SUGCTQ9HAC7 445 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 JPH1Q9HDC5 661 aaPredicted RBP16.89■□□□□ 0.29
HDAC6-204ENST00000376643 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 PCDHA6Q9UN73 950 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 PCDHA8Q9Y5H6 950 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 UBIAD1Q9Y5Z9 338 aa16.89■□□□□ 0.29
HDAC6-204ENST00000376643 M0QZ92 97 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 ARHGEF15O94989 841 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 ITGB5P18084 799 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 NAPAP54920 295 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 ADAM17P78536 824 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 AP3B2Q13367 1082 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 MKRN4PQ13434 485 aaPredicted RBP16.88■□□□□ 0.29
HDAC6-204ENST00000376643 RTN1Q16799 776 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 TIGD5Q53EQ6 642 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 MCTP2Q6DN12 878 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
HDAC6-204ENST00000376643 DHX32Q7L7V1 743 aaKnown RBP16.88■□□□□ 0.29
HDAC6-204ENST00000376643 TUBE1Q9UJT0 475 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 MTUS1Q9ULD2 1270 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 COL4A6Q14031 1691 aa16.88■□□□□ 0.29
HDAC6-204ENST00000376643 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 ZBTB43O43298 467 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 RXRAP19793 462 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 SLC26A2P50443 739 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 FGD1P98174 961 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 TFF2Q03403 129 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 TSGA10IPQ3SY00 556 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 APOA5Q6Q788 366 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
HDAC6-204ENST00000376643 CCDC82Q8N4S0 544 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 NFASCO94856 1347 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 NCOR1O75376 2440 aa16.87■□□□□ 0.29
HDAC6-204ENST00000376643 SPTBN5Q9NRC6 3674 aaKnown RBP16.86■□□□□ 0.29
HDAC6-204ENST00000376643 ADCY7P51828 1080 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 GRIK4Q16099 956 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 UBE2SQ16763 222 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 TCTN1Q2MV58 587 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 PUS10Q3MIT2 529 aaKnown RBP16.86■□□□□ 0.29
HDAC6-204ENST00000376643 IER5Q5VY09 327 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 CMTR1Q8N1G2 835 aaKnown RBP16.86■□□□□ 0.29
HDAC6-204ENST00000376643 MRPL38Q96DV4 380 aaKnown RBP16.86■□□□□ 0.29
HDAC6-204ENST00000376643 BCAS3Q9H6U6 928 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 RIC8AQ9NPQ8 531 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 SLC9A2Q9UBY0 812 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 SQORQ9Y6N5 450 aa16.86■□□□□ 0.29
HDAC6-204ENST00000376643 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-204ENST00000376643 NCK2O43639 380 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 CDC45O75419 566 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 KCNQ1P51787 676 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 KRT40Q6A162 431 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 CCDC12Q8WUD4 166 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-204ENST00000376643 IL17RAQ96F46 866 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 MXRA8Q9BRK3 442 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 FTHL17Q9BXU8 183 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 LRRC2Q9BYS8 371 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-204ENST00000376643 FAM50BQ9Y247 325 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 CNTNAP5Q8WYK1 1306 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 MICAL3Q7RTP6 2002 aa16.85■□□□□ 0.29
HDAC6-204ENST00000376643 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-204ENST00000376643 SIP14410 1827 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 PTPRSQ13332 1948 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 GSTTP1A0A1W2PQM5 241 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 ATP9AO75110 1047 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 UPP2O95045 317 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 RB1P06400 928 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 MARK3P27448 753 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 EPC2Q52LR7 807 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 WWC2Q6AWC2 1192 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 TSHZ1Q6ZSZ6 1077 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 NIPA1Q7RTP0 329 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 PLPPR4Q7Z2D5 763 aa16.84■□□□□ 0.29
HDAC6-204ENST00000376643 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms