RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 KCNA2P16389 499 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 ITGB5P18084 799 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 MCM5P33992 734 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 GNAQP50148 359 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 ARHGAP4P98171 946 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 NLRX1Q86UT6 975 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 EPHX3Q9H6B9 360 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
CLCN6-204ENST00000376491 ZNF215Q9UL58 517 aaPredicted RBP17.19■□□□□ 0.34
CLCN6-204ENST00000376491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.18■□□□□ 0.34
CLCN6-204ENST00000376491 GSTTP1A0A1W2PQM5 241 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 hCG_1642624A0A1W2PR95 340 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 UPP2O95045 317 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 TCF7P36402 384 aaPredicted RBP17.18■□□□□ 0.34
CLCN6-204ENST00000376491 LIFRP42702 1097 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 NECTIN1Q15223 517 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 UBE2SQ16763 222 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 EPC2Q52LR7 807 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 RUFY4Q6ZNE9 571 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 TMTC2Q8N394 836 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLCN6-204ENST00000376491 GPRASP2Q96D09 838 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 LRRC2Q9BYS8 371 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 UBE2ZQ9H832 354 aaPredicted RBP17.18■□□□□ 0.34
CLCN6-204ENST00000376491 UBIAD1Q9Y5Z9 338 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 NRCAMQ92823 1304 aa17.18■□□□□ 0.34
CLCN6-204ENST00000376491 RALGAPA2Q2PPJ7 1873 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 CREB3L3Q68CJ9 461 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 GIMAP8Q8ND71 665 aaPredicted RBP17.17■□□□□ 0.34
CLCN6-204ENST00000376491 YME1L1Q96TA2 773 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 CD320Q9NPF0 282 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 ATG2AQ2TAZ0 1938 aa17.17■□□□□ 0.34
CLCN6-204ENST00000376491 COL4A6Q14031 1691 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 LOXHD1Q8IVV2 1947 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 MGAT3Q09327 533 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 RPAINQ86UA6 219 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 FANCBQ8NB91 859 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 SEPT1Q8WYJ6 367 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 APBB2Q92870 758 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 C1QTNF1Q9BXJ1 281 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 IFIH1Q9BYX4 1025 aaKnown RBP17.16■□□□□ 0.34
CLCN6-204ENST00000376491 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 PKD2L1Q9P0L9 805 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 TTC3P53804 2025 aa17.16■□□□□ 0.34
CLCN6-204ENST00000376491 H3BNC9 293 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 CALM1P0DP23 149 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 CALM2P0DP24 149 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 CALM3P0DP25 149 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 GHRP10912 638 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 MARK3P27448 753 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 PPFIA1Q13136 1202 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 TMTC3Q6ZXV5 915 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 TMEM192Q8IY95 271 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.15■□□□□ 0.34
CLCN6-204ENST00000376491 MRPL38Q96DV4 380 aaKnown RBP17.15■□□□□ 0.34
CLCN6-204ENST00000376491 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 SAMD11Q96NU1 681 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 PCYT2Q99447 389 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 JADE2Q9NQC1 790 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 PCDHA6Q9UN73 950 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 PCDHA8Q9Y5H6 950 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 SLC12A7Q9Y666 1083 aa17.15■□□□□ 0.34
CLCN6-204ENST00000376491 MBLAC1A4D2B0 266 aaPredicted RBP17.14■□□□□ 0.33
CLCN6-204ENST00000376491 LINC00271P0C7V0 271 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 KCNA5P22460 613 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 GPM6BQ13491 265 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 MTMR1Q13613 665 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 LPIN1Q14693 890 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 GRIK4Q16099 956 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 LEXMQ3ZCV2 418 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 MARCH8Q5T0T0 291 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 TAF2Q6P1X5 1199 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 SGMS1Q86VZ5 419 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 ERAP1Q9NZ08 941 aa17.14■□□□□ 0.33
CLCN6-204ENST00000376491 SPDYE3A6NKU9 549 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 IL9P15248 144 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 TYW1BQ6NUM6 668 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 DNAJB3Q8WWF6 145 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 GLG1Q92896 1179 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 ZBTB10Q96DT7 871 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 LRFN3Q9BTN0 628 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 SMARCAD1Q9H4L7 1026 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 TUBE1Q9UJT0 475 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 CNTNAP5Q8WYK1 1306 aa17.13■□□□□ 0.33
CLCN6-204ENST00000376491 MAFGO15525 162 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 PTPROQ16827 1216 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 FBXO47Q5MNV8 452 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 SKAP1Q86WV1 359 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 FAM178BQ8IXR5 827 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 BANK1Q8NDB2 785 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
CLCN6-204ENST00000376491 RC3H2Q9HBD1 1191 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms