RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 CHAMP1Q96JM3 812 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 SCAND2PQ9GZW5 306 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 LMBRD1Q9NUN5 540 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 BARHL2Q9NY43 387 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 TFIP11Q9UBB9 837 aaKnown RBP12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 NOD1Q9Y239 953 aa12.46□□□□□ -0.41
HLA-DQA1-202ENST00000374949 LOC102724159A0A0B4J2E5 919 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 BTBD18B2RXH4 712 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 ARIH2O95376 493 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 IQCF3P0C7M6 154 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 EDNRBP24530 442 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 KRT2P35908 639 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 RPS6P62753 249 aaKnown RBP12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PWP2Q15269 919 aaKnown RBP12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SKOR2Q2VWA4 1001 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 BRDTQ58F21 947 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NFRKBQ6P4R8 1299 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 HEATR3Q7Z4Q2 680 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TMCO2Q7Z6W1 182 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 HOMER1Q86YM7 354 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 DIS3L2Q8IYB7 885 aaKnown RBP12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CCDC148Q8NFR7 591 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SCFD2Q8WU76 684 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MTMR8Q96EF0 704 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 KIAA1217Q5T5P2 1943 aa12.45□□□□□ -0.42
HLA-DQA1-202ENST00000374949 A6NJR5 290 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 STXBP3O00186 592 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 ZBTB5O15062 677 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NKRFO15226 690 aaKnown RBP eCLIP12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TXNP10599 105 aaKnown RBP12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 POU3F3P20264 500 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GRB10Q13322 594 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 USH1GQ495M9 461 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NOSTRINQ8IVI9 506 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GPKOWQ92917 476 aaPredicted RBP eCLIP12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 FAM122AQ96E09 287 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CTAGE1Q96RT6 745 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MYH6P13533 1939 aa12.44□□□□□ -0.42
HLA-DQA1-202ENST00000374949 LCHNA4D1U4 455 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SMCO2A6NFE2 343 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 FIBPO43427 364 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TLL1O43897 1013 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MMP3P08254 477 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 KCNJ6P48051 423 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NAPAP54920 295 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 BFSP2Q13515 415 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PTGISQ16647 500 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 BLIDQ8IZY5 108 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PHOSPHO2Q8TCD6 241 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GDPD5Q8WTR4 605 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SPATA32Q96LK8 384 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 MPHOSPH6Q99547 160 aaKnown RBP12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GDPD2Q9HCC8 539 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 C6orf50Q9HD87 102 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 RTEL1Q9NZ71 1219 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 RCOR1Q9UKL0 485 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 SIP14410 1827 aa12.43□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TRAK2O60296 914 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 KPNA6O60684 536 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 LPXNO60711 386 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 BAIAP3O94812 1187 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GNA11P29992 359 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 WDR5P61964 334 aaKnown RBP12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 DEFB103AP81534 67 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TRAF1Q13077 416 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NR5A1Q13285 461 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GDF6Q6KF10 455 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 DAGLBQ8NCG7 672 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 DNERQ8NFT8 737 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 AFG1LQ8WV93 481 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 ZMYND12Q9H0C1 365 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 EPHX3Q9H6B9 360 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 COG5Q9UP83 839 aa12.42□□□□□ -0.42
HLA-DQA1-202ENST00000374949 ESYT2A0FGR8 921 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 ARHGAP1Q07960 439 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 GPNMBQ14956 572 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 NPY5RQ15761 445 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 CDC37Q16543 378 aaPredicted RBP12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 QRICH1Q2TAL8 776 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
HLA-DQA1-202ENST00000374949 AFAP1L1Q8TED9 768 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms