RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TAF1DQ9H5J8 278 aaPredicted RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 RBAK-RBAKDNI3L0D1 243 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 SERPING1P05155 500 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 HSPA9P38646 679 aaKnown RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 UAP1Q16222 522 aaPredicted RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 EMC10Q5UCC4 262 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 CCDC121Q6ZUS5 278 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 KCNK18Q7Z418 384 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 DDX12PQ92771 950 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 PAGR1Q9BTK6 254 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 NEUROG2Q9H2A3 272 aa16.25■□□□□ 0.19
COL9A2-202ENST00000372748 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
COL9A2-202ENST00000372748 FGFR1OPO95684 399 aaKnown RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 ECHS1P30084 290 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 SMTNP53814 917 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 TNNC1P63316 161 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GSTO1P78417 241 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 SF3A3Q12874 501 aaKnown RBP eCLIP16.24■□□□□ 0.191e-8■□□□□ 9.2
COL9A2-202ENST00000372748 CEP57Q86XR8 500 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 ZMYND12Q9H0C1 365 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 ATP6V0A2Q9Y487 856 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 FRMPD2Q68DX3 1309 aaPredicted RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GOLGA6L7A0A1B0GV03 622 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 DCDC2CA8MYV0 355 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 CHUKO15111 745 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 CEP104O60308 925 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 RASSF9O75901 435 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 RFC4P35249 363 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 FLT3P36888 993 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 LRRC63Q05C16 580 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GRAPQ13588 217 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GALNT17Q6IS24 598 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 C6orf89Q6UWU4 347 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 KRT25Q7Z3Z0 450 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 ZNF804AQ7Z570 1209 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 TEX11Q8IYF3 940 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GRAPLQ8TC17 118 aaPredicted RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 UBLCP1Q8WVY7 318 aaPredicted RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 CEP95Q96GE4 821 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 OSBPL7Q9BZF2 842 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 CEP72Q9P209 647 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 PCDHGC5Q9Y5F6 944 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GMNCA6NCL1 334 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 DNM1LO00429 736 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 CDR1P51861 262 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 EIF6P56537 245 aaKnown RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 ZNF844Q08AG5 666 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 SLC18A3Q16572 532 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 NELFCDQ8IXH7 590 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 TAF4BQ92750 862 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 GJA10Q969M2 543 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 DDX47Q9H0S4 455 aaKnown RBP16.24■□□□□ 0.19
COL9A2-202ENST00000372748 LEMD3Q9Y2U8 911 aa16.24■□□□□ 0.19
COL9A2-202ENST00000372748 USP17L5A8MUK1 530 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 PDHBP11177 359 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 PPP4CP60510 307 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 GPSM2P81274 684 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 KLHL30Q0D2K2 578 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 COBLL1Q53SF7 1204 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 FGFBP2Q9BYJ0 223 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 PLCB1Q9NQ66 1216 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 SLC37A4O43826 429 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 LDHCP07864 332 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 RPS6KA1Q15418 735 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
COL9A2-202ENST00000372748 PPP4R3AQ6IN85 833 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 GIMAP7Q8NHV1 300 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 COA7Q96BR5 231 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 TSG101Q99816 390 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 ISCUQ9H1K1 167 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 LRRC4CQ9HCJ2 640 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 LUC7LQ9NQ29 371 aaKnown RBP16.23■□□□□ 0.19
COL9A2-202ENST00000372748 HAUS2Q9NVX0 235 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 CNOT8Q9UFF9 292 aaKnown RBP16.23■□□□□ 0.19
COL9A2-202ENST00000372748 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
COL9A2-202ENST00000372748 SLC12A6Q9UHW9 1150 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 COL4A3BPQ9Y5P4 624 aa16.23■□□□□ 0.19
COL9A2-202ENST00000372748 ROBO3Q96MS0 1386 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 PVALEFA0A1B0GWK0 134 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 FAM170AA1A519 330 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 H0YGN5 161 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 UFL1O94874 794 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 TDP2O95551 362 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 CALCRLQ16602 461 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 CLEC10AQ8IUN9 316 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 SNX29Q8TEQ0 813 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 FBXL5Q9UKA1 691 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 NOVA2Q9UNW9 492 aaKnown RBP16.22■□□□□ 0.19
COL9A2-202ENST00000372748 NFS1Q9Y697 457 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 CACNB1Q02641 598 aaPredicted RBP16.22■□□□□ 0.19
COL9A2-202ENST00000372748 ARFGAP2Q8N6H7 521 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 CD209Q9NNX6 404 aa16.22■□□□□ 0.19
COL9A2-202ENST00000372748 TNRC6CQ9HCJ0 1690 aaKnown RBP16.21■□□□□ 0.19
COL9A2-202ENST00000372748 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.19
COL9A2-202ENST00000372748 CNBD1Q8NA66 436 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms