RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 RHOT2Q8IXI1 618 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 CCT6BQ92526 530 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 ZNF653Q96CK0 615 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 MROH2AA6NES4 1674 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 CAMTA2O94983 1202 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 GNGT1P63211 74 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 SCARF1Q14162 830 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 COL3A1P02461 1466 aaPredicted RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 ECE2O60344 883 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 GLE1Q53GS7 698 aaKnown RBP11.39□□□□□ -0.59
NUP188-201ENST00000372577 FAM133AQ8N9E0 248 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 MMS19Q96T76 1030 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 DAAM1Q9Y4D1 1078 aa11.39□□□□□ -0.59
NUP188-201ENST00000372577 SPATA31A6Q5VVP1 1343 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 MAPK4P31152 587 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 ACRBPQ8NEB7 543 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 MCPH1Q8NEM0 835 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 EDEM3Q9BZQ6 932 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 MEIS1O00470 390 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 GPSM2P81274 684 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 CACNA2D3Q8IZS8 1091 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 WHAMMQ8TF30 809 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 FAM167AQ96KS9 214 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 SPATA31A1Q5TZJ5 1347 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 A0A1W2PQC6 194 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 UBXN2AP68543 259 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PDIA6Q15084 440 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 FAM182BQ5T319 152 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 GUF1Q8N442 669 aaKnown RBP11.38□□□□□ -0.59
NUP188-201ENST00000372577 ANKRD13CQ8N6S4 541 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PSMD1Q99460 953 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.38□□□□□ -0.59
NUP188-201ENST00000372577 CLIC2O15247 247 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 GMNNO75496 209 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 SFNP31947 248 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 KRT76Q01546 638 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PDIA5Q14554 519 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 MESDQ14696 234 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 KIF22Q14807 665 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 RSPH3Q86UC2 560 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 TCP11Q8WWU5 503 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 MAGOHBQ96A72 148 aaKnown RBP11.38□□□□□ -0.59
NUP188-201ENST00000372577 GJD4Q96KN9 370 aaPredicted RBP11.38□□□□□ -0.59
NUP188-201ENST00000372577 DPH5Q9H2P9 285 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PPANQ9NQ55 473 aaKnown RBP11.38□□□□□ -0.59
NUP188-201ENST00000372577 ABHD10Q9NUJ1 306 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 ARHGEF28Q8N1W1 1705 aaKnown RBP11.38□□□□□ -0.59
NUP188-201ENST00000372577 CCDC188H7C350 402 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 IFNB1P01574 187 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 RFX1P22670 979 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 KCNJ6P48051 423 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 NEDD9Q14511 834 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 CASC4Q6P4E1 433 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
NUP188-201ENST00000372577 PDS5AQ29RF7 1337 aaKnown RBP11.37□□□□□ -0.59
NUP188-201ENST00000372577 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 ELOA2Q8IYF1 753 aaPredicted RBP11.37□□□□□ -0.59
NUP188-201ENST00000372577 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 COBLO75128 1261 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 HEXIM1O94992 359 aaKnown RBP11.37□□□□□ -0.59
NUP188-201ENST00000372577 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 NFIXQ14938 502 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 CCDC13Q8IYE1 715 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 A0A087WWV3 80 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 ARHGEF37A1IGU5 675 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 CAPN9O14815 690 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 GIPC1O14908 333 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 CRCPO75575 148 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 SMARCA1P28370 1054 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
NUP188-201ENST00000372577 GOLGA8FQ08AF8 430 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 GOLGA8DPQ0D2H9 430 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 ANKRD20A3Q5VUR7 823 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 ZNF341Q9BYN7 854 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 CCSER1Q9C0I3 900 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 UBE2TQ9NPD8 197 aaPredicted RBP11.37□□□□□ -0.59
NUP188-201ENST00000372577 GJB4Q9NTQ9 266 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 KLHL14Q9P2G3 628 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 BCAP29Q9UHQ4 241 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 ENC1O14682 589 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 GFPT2O94808 682 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 GKAP1Q5VSY0 366 aaPredicted RBP11.37□□□□□ -0.59
NUP188-201ENST00000372577 SHC4Q6S5L8 630 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 KCNB2Q92953 911 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 MCUR1Q96AQ8 359 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 PHF20Q9BVI0 1012 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
NUP188-201ENST00000372577 WDR64B1ANS9 1081 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 SLMAPQ14BN4 828 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 NAALADL2Q58DX5 795 aa11.36□□□□□ -0.59
NUP188-201ENST00000372577 GPR101Q96P66 508 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms