RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 HOXB3P14651 431 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 ALDH3A1P30838 453 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 IGBP1P78318 339 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 Q4G0T1 1027 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 SPECC1Q5M775 1068 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 OTUD7BQ6GQQ9 843 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 RAB11FIP4Q86YS3 637 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 IFNL3Q8IZI9 196 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 DPF2Q92785 391 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 C8orf76Q96K31 380 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 PRKD2Q9BZL6 878 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 UBA5Q9GZZ9 404 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 OSBPL2Q9H1P3 480 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 UNC45AQ9H3U1 944 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 EPB41L4AQ9HCS5 686 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 INCENPQ9NQS7 918 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 TMEM98Q9Y2Y6 226 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 MYH15Q9Y2K3 1946 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 B4E1Z4 1266 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 PENKP01210 267 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 CDC25CP30307 473 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 AKAP17AQ02040 695 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 FAM98CQ17RN3 349 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 SPRED3Q2MJR0 410 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 TC2NQ8N9U0 490 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 LINC00116Q8NCU8 138 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 CDC5LQ99459 802 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 NAPGQ99747 312 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 UBE2OQ9C0C9 1292 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 ZCWPW1Q9H0M4 648 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 QTRT2Q9H974 415 aaKnown RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 ARMT1Q9H993 441 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 TMOD4Q9NZQ9 345 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 BAIAP2L1Q9UHR4 511 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 TRPC5Q9UL62 973 aaPredicted RBP9.72□□□□□ -0.85
ATG4A-203ENST00000372232 ARAP2Q8WZ64 1704 aa9.72□□□□□ -0.85
ATG4A-203ENST00000372232 NEDD4P46934 1319 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 GSG1L2A8MUP6 293 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 E2F6O75461 281 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 ATP1A3P13637 1013 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 NLRP12P59046 1061 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 AMPD2Q01433 879 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 TTMPQ5BVD1 217 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF569Q5MCW4 686 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 ZNF746Q6NUN9 644 aaPredicted RBP9.71□□□□□ -0.85
ATG4A-203ENST00000372232 PDXDC2PQ6P474 469 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 CCNI2Q6ZMN8 369 aaPredicted RBP9.71□□□□□ -0.85
ATG4A-203ENST00000372232 MCF2L2Q86YR7 1114 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 SYCP3Q8IZU3 236 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 IGDCC4Q8TDY8 1250 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 SLC35B4Q969S0 331 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 TMEM87BQ96K49 555 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 ANKRD27Q96NW4 1050 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 DESI2Q9BSY9 194 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 OSBPL1AQ9BXW6 950 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 NAPBQ9H115 298 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 PCMTD2Q9NV79 361 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 WDR37Q9Y2I8 494 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 GMEB1Q9Y692 573 aa9.71□□□□□ -0.85
ATG4A-203ENST00000372232 DDX60Q8IY21 1712 aaKnown RBP9.71□□□□□ -0.86
ATG4A-203ENST00000372232 FAM13AO94988 1023 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 VIMP08670 466 aaKnown RBP9.71□□□□□ -0.86
ATG4A-203ENST00000372232 CYP11B2P19099 503 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 METAP2P50579 478 aaKnown RBP eCLIP9.71□□□□□ -0.86
ATG4A-203ENST00000372232 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.86
ATG4A-203ENST00000372232 ERFEQ4G0M1 354 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 APOA5Q6Q788 366 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 ARMC9Q7Z3E5 817 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 AENQ8WTP8 325 aaKnown RBP9.71□□□□□ -0.86
ATG4A-203ENST00000372232 KCNN1Q92952 543 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 MOV10L1Q9BXT6 1211 aaKnown RBP9.71□□□□□ -0.86
ATG4A-203ENST00000372232 C2CD2Q9Y426 696 aa9.71□□□□□ -0.86
ATG4A-203ENST00000372232 PNPLA7Q6ZV29 1317 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LRRD1A4D1F6 860 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 DPPA5A6NC42 116 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 TMEM221A6NGB7 291 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 PRKAB2O43741 272 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 TFRCP02786 760 aaKnown RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ALADP13716 330 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 NPR3P17342 541 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 GNAT2P19087 354 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ME1P48163 572 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 CCNG1P51959 295 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 PLCB3Q01970 1234 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ARID5AQ03989 594 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LBRQ14739 615 aaKnown RBP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 VPS72Q15906 364 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 CFAP100Q494V2 611 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 MSL1Q68DK7 614 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 SGMS1Q86VZ5 419 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LCORLQ8N3X6 602 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LINC00301Q8NCQ3 95 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 ARMC5Q96C12 935 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 CYFIP2Q96F07 1278 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 LY9Q9HBG7 655 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 GJB4Q9NTQ9 266 aa9.7□□□□□ -0.86
ATG4A-203ENST00000372232 FANCLQ9NW38 375 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms