RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 ARPP19P56211 112 aa25.88■■□□□ 1.73
RAPGEF1-203ENST00000372195 PPWD1Q96BP3 646 aaKnown RBP25.88■■□□□ 1.73
RAPGEF1-203ENST00000372195 HP1BP3Q5SSJ5 553 aaPredicted RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 GPATCH4Q5T3I0 446 aaKnown RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 DCAF15Q66K64 600 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 XAB2Q9HCS7 855 aaKnown RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 DNAJC24Q6P3W2 148 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 MORC4Q8TE76 937 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 DCPSQ96C86 337 aaKnown RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 NEDD4P46934 1319 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 NCF2P19878 526 aaPredicted RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 BPIFB4P59827 614 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 RYBPQ8N488 228 aaPredicted RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 SPZ1Q9BXG8 430 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 NDST4Q9H3R1 872 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 CYP2D6P10635 497 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 TFDP1Q14186 410 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 OR6B2Q6IFH4 312 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 SYNMO15061 1565 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 LMNB2Q03252 620 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 MKRN3Q13064 507 aaKnown RBP25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 NECTIN1Q15223 517 aa25.87■■□□□ 1.73
RAPGEF1-203ENST00000372195 ATP10DQ9P241 1426 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 STAT2P52630 851 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 DEPDC1BQ8WUY9 529 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 SNX25Q9H3E2 840 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 PRR29P0C7W0 189 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 TOB2Q14106 344 aaPredicted RBP25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 PDCD7Q8N8D1 485 aaKnown RBP25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 PIGOQ8TEQ8 1089 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 NLRP7Q8WX94 980 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 RASGRF1Q13972 1273 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 NLRP10Q86W26 655 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 MAML1Q92585 1016 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 RETREG2Q8NC44 543 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 KLHL29Q96CT2 875 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 JRKLQ9Y4A0 524 aa25.86■■□□□ 1.73
RAPGEF1-203ENST00000372195 MT-ND3P03897 115 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 CDC37Q16543 378 aaPredicted RBP25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 ARHGEF18Q6ZSZ5 1173 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 PBKQ96KB5 322 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 KIF9Q9HAQ2 790 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 BMP3P12645 472 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 NR1D1P20393 614 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 CCND2P30279 289 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 SLC7A3Q8WY07 619 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 PLAAQ9Y263 795 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 NUB1Q9Y5A7 615 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 CFLARO15519 480 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 S100BP04271 92 aaPredicted RBP25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 ATP6V1E2Q96A05 226 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 NACC1Q96RE7 527 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 ZMYND12Q9H0C1 365 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 GINM1Q9NU53 330 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 IPO11Q9UI26 975 aaKnown RBP25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 BAG5Q9UL15 447 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 ANGPTL3Q9Y5C1 460 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 PALMO75781 387 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 ZBED6P86452 979 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 AP1ARQ63HQ0 302 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 SDCCAG3Q96C92 435 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 SRP68Q9UHB9 627 aaKnown RBP25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 RAD17O75943 681 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 SRGAP2CP0DJJ0 459 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 CCNE1P24864 410 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 CYB5R4Q7L1T6 521 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 DPP9Q86TI2 863 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 SLC5A4Q9NY91 659 aa25.85■■□□□ 1.73
RAPGEF1-203ENST00000372195 KDM5DQ9BY66 1539 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 EXOC1LA0A1B0GW35 172 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 NMT2O60551 498 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 RESP18Q5W5W9 173 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 ATP6V0A1Q93050 837 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 PANX2Q96RD6 677 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 MIS12Q9H081 205 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 EPC1Q9H2F5 836 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 ADAMTS1Q9UHI8 967 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 STK17AQ9UEE5 414 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 PFDN1O60925 122 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 MFAP3LO75121 409 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 MCAMP43121 646 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 HEXIM2Q96MH2 286 aaKnown RBP25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 LEMD3Q9Y2U8 911 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 HNRNPH2P55795 449 aaKnown RBP25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 TTC4O95801 387 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 PARVGQ9HBI0 331 aa25.84■■□□□ 1.73
RAPGEF1-203ENST00000372195 BBS9Q3SYG4 887 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 SPATA31E1Q6ZUB1 1445 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 F5H423 210 aaPredicted RBP25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 SERPINB2P05120 415 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 SH3RF3Q8TEJ3 882 aaPredicted RBP25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 ABTB1Q969K4 478 aaPredicted RBP25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 GNGT2O14610 69 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 RASGRF2O14827 1237 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 GFPT1Q06210 699 aaPredicted RBP25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 TAF11Q15544 211 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 TBC1D10CQ8IV04 446 aa25.83■■□□□ 1.73
RAPGEF1-203ENST00000372195 PIP4K2CQ8TBX8 421 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms