RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 LRRC63Q05C16 580 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 TRADDQ15628 312 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 CERKLQ49MI3 558 aaPredicted RBP12.17□□□□□ -0.46
NSL1-202ENST00000366977 FAM83BQ5T0W9 1011 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 KLHDC7AQ5VTJ3 777 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 GJB7Q6PEY0 223 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
NSL1-202ENST00000366977 ZNF662Q6ZS27 426 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 CERS3Q8IU89 383 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 FAM133AQ8N9E0 248 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 LENG9Q96B70 501 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 TLR10Q9BXR5 811 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 TDRD3Q9H7E2 651 aaKnown RBP12.17□□□□□ -0.46
NSL1-202ENST00000366977 RGL1Q9NZL6 768 aa12.17□□□□□ -0.46
NSL1-202ENST00000366977 SCAF8Q9UPN6 1271 aaKnown RBP12.17□□□□□ -0.46
NSL1-202ENST00000366977 A0A087X0T9 212 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 hCG_1984214I3L0E3 225 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 IPO7O95373 1038 aaKnown RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 MMP10P09238 476 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 FAM228BP0C875 321 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 KLRC1P26715 233 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 CASP4P49662 377 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 CDK17Q00537 523 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 SKIDA1Q1XH10 827 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 SFR1Q86XK3 245 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 CDAN1Q8IWY9 1227 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 ZNF713Q8N859 430 aaPredicted RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 ETNPPLQ8TBG4 499 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 TRIM34Q9BYJ4 488 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 EMILIN3Q9NT22 766 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 F5H6K3 240 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 LCA5LO95447 670 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 CHRNA5P30532 468 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 GGCXP38435 758 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 ECE1P42892 770 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 NAP1L1P55209 391 aaKnown RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 ARHGAP4P98171 946 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 FKBP3Q00688 224 aaKnown RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 KLRC3Q07444 240 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 RAPGEF1Q13905 1077 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 GIT2Q14161 759 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 DPY19L2P1Q6NXN4 242 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 TSG101Q99816 390 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 REEP2Q9BRK0 252 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 SELENOOQ9BVL4 669 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 RUSC1Q9BVN2 902 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 RAB34Q9BZG1 259 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 DHX36Q9H2U1 1008 aaKnown RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 RBM12Q9NTZ6 932 aaKnown RBP12.16□□□□□ -0.46
NSL1-202ENST00000366977 BCS1LQ9Y276 419 aa12.16□□□□□ -0.46
NSL1-202ENST00000366977 ESYT3A0FGR9 886 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 ANKRD65E5RJM6 399 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 CLIC2O15247 247 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 NDUFB10O96000 172 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 KRT18P05783 430 aaKnown RBP12.15□□□□□ -0.46
NSL1-202ENST00000366977 PPARDQ03181 441 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 IKQ13123 557 aaPredicted RBP12.15□□□□□ -0.46
NSL1-202ENST00000366977 ORC2Q13416 577 aaPredicted RBP12.15□□□□□ -0.46
NSL1-202ENST00000366977 ADAM9Q13443 819 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 HYIQ5T013 277 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
NSL1-202ENST00000366977 TRIM59Q8IWR1 403 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 TSEN2Q8NCE0 465 aaKnown RBP12.15□□□□□ -0.46
NSL1-202ENST00000366977 SPATA4Q8NEY3 305 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 CRYGNQ8WXF5 182 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.15□□□□□ -0.46
NSL1-202ENST00000366977 EHD4Q9H223 541 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 RABEP2Q9H5N1 569 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 FAM204AQ9H8W3 233 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 RNF40O75150 1001 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 TACC1O75410 805 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 PALMO75781 387 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 GH2P01242 217 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 ICA1Q05084 483 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 PPP1R18Q6NYC8 613 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 HHIPL2Q6UWX4 724 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 CCDC84Q86UT8 332 aaPredicted RBP12.15□□□□□ -0.46
NSL1-202ENST00000366977 TXLNBQ8N3L3 684 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 GANQ9H2C0 597 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 ADAMTS1Q9UHI8 967 aa12.15□□□□□ -0.46
NSL1-202ENST00000366977 SLX4Q8IY92 1834 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 MSH4O15457 936 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 SEMA3FQ13275 785 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 CTTNQ14247 550 aaKnown RBP12.14□□□□□ -0.47
NSL1-202ENST00000366977 ZSCAN26Q16670 478 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 AOC3Q16853 763 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 HAUS3Q68CZ6 603 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 JRKLQ9Y4A0 524 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.14□□□□□ -0.47
NSL1-202ENST00000366977 ANO9A1A5B4 782 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 CHMP2AO43633 222 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 ECE2O60344 883 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
NSL1-202ENST00000366977 NPR1P16066 1061 aa12.14□□□□□ -0.47
NSL1-202ENST00000366977 NR2F2P24468 414 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms