RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 MTMR9Q96QG7 549 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 USO1O60763 962 aaKnown RBP16.23■□□□□ 0.19
PRKN-204ENST00000366896 GNGT1P63211 74 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 SPA17Q15506 151 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 SAMD7Q7Z3H4 446 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 GUF1Q8N442 669 aaKnown RBP16.23■□□□□ 0.19
PRKN-204ENST00000366896 SECISBP2LQ93073 1101 aaKnown RBP16.23■□□□□ 0.19
PRKN-204ENST00000366896 LRRC27Q9C0I9 530 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 UBA5Q9GZZ9 404 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 ZNF70Q9UC06 446 aaPredicted RBP16.23■□□□□ 0.19
PRKN-204ENST00000366896 FAM198AQ9UFP1 575 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 SIK3Q9Y2K2 1263 aa16.23■□□□□ 0.19
PRKN-204ENST00000366896 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
PRKN-204ENST00000366896 IDEP14735 1019 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 TXKP42681 527 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 LRRC63Q05C16 580 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 GRB10Q13322 594 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 VWA3BQ502W6 1294 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 KCNV1Q6PIU1 500 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 SND1Q7KZF4 910 aaKnown RBP eCLIP16.22■□□□□ 0.19
PRKN-204ENST00000366896 SV2BQ7L1I2 683 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 RIOX1Q9H6W3 641 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 ATXN2Q99700 1313 aaKnown RBP16.22■□□□□ 0.19
PRKN-204ENST00000366896 CLRN2A0PK11 232 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 OPA1O60313 960 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 EPB41P11171 864 aaKnown RBP16.22■□□□□ 0.19
PRKN-204ENST00000366896 SKOR1P84550 965 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 PDIA5Q14554 519 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
PRKN-204ENST00000366896 CEP95Q96GE4 821 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 BLOC1S4Q9NUP1 217 aa16.22■□□□□ 0.19
PRKN-204ENST00000366896 SEC63Q9UGP8 760 aaKnown RBP16.22■□□□□ 0.19
PRKN-204ENST00000366896 MYMKA6NI61 221 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 INPP5BP32019 993 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 PSMD2Q13200 908 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 MAN2A1Q16706 1144 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
PRKN-204ENST00000366896 CREG2Q8IUH2 290 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 CNPY4Q8N129 248 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 REXO1Q8N1G1 1221 aaKnown RBP16.21■□□□□ 0.19
PRKN-204ENST00000366896 PNMA5Q96PV4 448 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 SNX12Q9UMY4 172 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 PLIN4Q96Q06 1357 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 A6NNZ2 444 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 SLC37A4O43826 429 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 TACC1O75410 805 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 ERCC3P19447 782 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 USP8P40818 1118 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 EPS15P42566 896 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 TUBB8Q3ZCM7 444 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 FBXW10Q5XX13 1052 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 ZFPM1Q8IX07 1006 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 NDST4Q9H3R1 872 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 SH2D4AQ9H788 454 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 FAM207AQ9NSI2 230 aaPredicted RBP16.21■□□□□ 0.19
PRKN-204ENST00000366896 TMOD2Q9NZR1 351 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 ARHGAP20Q9P2F6 1191 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 CAPN6Q9Y6Q1 641 aa16.21■□□□□ 0.19
PRKN-204ENST00000366896 FRMPD2Q68DX3 1309 aaPredicted RBP16.2■□□□□ 0.18
PRKN-204ENST00000366896 PJA2O43164 708 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 EHHADHQ08426 723 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 DPY19L2Q6NUT2 758 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 DYMQ7RTS9 669 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 RAB34Q9BZG1 259 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 RIC8AQ9NPQ8 531 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 EDIL3O43854 480 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 ENTPD3O75355 529 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 TDP2O95551 362 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 TCP10Q12799 353 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 SEPT2Q15019 361 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 CCDC96Q2M329 555 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 CCDC155Q8N6L0 562 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 HDAC7Q8WUI4 952 aa16.2■□□□□ 0.18
PRKN-204ENST00000366896 DMGDHQ9UI17 866 aaKnown RBP16.2■□□□□ 0.18
PRKN-204ENST00000366896 POTEMA6NI47 508 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 TCP1P17987 556 aaKnown RBP16.19■□□□□ 0.18
PRKN-204ENST00000366896 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 ALS2CLQ60I27 953 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 PRPF38AQ8NAV1 312 aaKnown RBP16.19■□□□□ 0.18
PRKN-204ENST00000366896 GLIS3Q8NEA6 775 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 TRPM4Q8TD43 1214 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 LARP4BQ92615 738 aaKnown RBP16.19■□□□□ 0.18
PRKN-204ENST00000366896 HINFPQ9BQA5 517 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 LRRC1Q9BTT6 524 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 RABEP2Q9H5N1 569 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 SSU72P8A0A1W2PR75 194 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 TCP10L2B9ZVM9 353 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 MNAT1P51948 309 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 EPHB4P54760 987 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 ATP2B2Q01814 1243 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 CALCRLQ16602 461 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 TTMPQ5BVD1 217 aa16.19■□□□□ 0.18
PRKN-204ENST00000366896 FKBP1CQ5VVH2 108 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms