RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 ADA2Q9NZK5 511 aa18.6■□□□□ 0.57
CACNA1A-201ENST00000360228 COL4A3BPQ9Y5P4 624 aa18.6■□□□□ 0.57
CACNA1A-201ENST00000360228 POLR2MP0CAP2 368 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 SCG2P13521 617 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 ANXA13P27216 316 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 FAM160B1Q5W0V3 765 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 C7orf31Q8N865 590 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 GTSE1Q9NYZ3 720 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 LRFN2Q9ULH4 789 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 CACNA1FO60840 1977 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 ZNF18P17022 549 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 ACAD11Q709F0 780 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 KRT7P08729 469 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 PFKFB1P16118 471 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 MDM2Q00987 491 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 RABGGTAQ92696 567 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 ALAS1P13196 640 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 DHX9Q08211 1270 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 ZNF594Q96JF6 807 aaPredicted RBP18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 PRPSAP2O60256 369 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 SPATA5Q8NB90 893 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 RNF139Q8WU17 664 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 ZMYND12Q9H0C1 365 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 SLC7A5Q01650 507 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 NCAPG2Q86XI2 1143 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 EDEM3Q9BZQ6 932 aa18.59■□□□□ 0.57
CACNA1A-201ENST00000360228 H0Y626 953 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 TRIM16O95361 564 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 HAUS4Q9H6D7 363 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 AS3MTQ9HBK9 375 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 BAZ2BQ9UIF8 2168 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 XPOTO43592 962 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 COBLO75128 1261 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 IRX1P78414 480 aaPredicted RBP18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 KRT26Q7Z3Y9 468 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 CNPY4Q8N129 248 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 ASZ1Q8WWH4 475 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 NCOA1Q15788 1441 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 PGRMC1O00264 195 aaKnown RBP18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 FMNL1O95466 1100 aaPredicted RBP18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 SRGAP2CP0DJJ0 459 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 POLA2Q14181 598 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 RBBP7Q16576 425 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 FSCBQ5H9T9 825 aa18.58■□□□□ 0.57
CACNA1A-201ENST00000360228 LZTS3O60299 673 aaPredicted RBP18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 ARPP19P56211 112 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 RNF103-CHMP3A0A140T963 221 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 HIBCHQ6NVY1 386 aaPredicted RBP18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 CHURC1Q8WUH1 139 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 SUPT3HO75486 399 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 CCDC142Q17RM4 750 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 NIM1KQ8IY84 436 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 NOS1P29475 1434 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 CCDC78A2IDD5 438 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 PI4K2BG5E9Z4 385 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 NR1D1P20393 614 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 MCTP2Q6DN12 878 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 BLIDQ8IZY5 108 aa18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 PPARGC1AQ9UBK2 798 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 APOBEC2Q9Y235 224 aaKnown RBP18.58■□□□□ 0.56
CACNA1A-201ENST00000360228 TFAP4Q01664 338 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 ZNF467Q7Z7K2 595 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 EIF4G3O43432 1585 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 ABCC1P33527 1531 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 NFKBIAP25963 317 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 TMPRSS15P98073 1019 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 NNTQ13423 1086 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 DNAJC24Q6P3W2 148 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 LVRNQ6Q4G3 990 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 SYT2Q8N9I0 419 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 CCDC195A0A1B0GUA6 201 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 ADALQ6DHV7 355 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 MRPL40Q9NQ50 206 aaKnown RBP18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 CHGBP05060 677 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 NT5C1BQ96P26 610 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 YIPF3Q9GZM5 350 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 FANCLQ9NW38 375 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 C4BPBP20851 252 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 RNF219Q5W0B1 726 aaPredicted RBP18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 ANKRD13CQ8N6S4 541 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 MID2Q9UJV3 735 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 ARL13BQ3SXY8 428 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 ODR4Q5SWX8 454 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 TFDP1Q14186 410 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 GINS4Q9BRT9 223 aa18.57■□□□□ 0.56
CACNA1A-201ENST00000360228 DTNBO60941 627 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 TCF3P15923 654 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 TFAMQ00059 246 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 TBL3Q12788 808 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 PDCD6IPQ8WUM4 868 aaKnown RBP18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 C10orf88Q9H8K7 445 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 LRRC4Q9HBW1 653 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 ADCY3O60266 1144 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 DEAF1O75398 565 aaPredicted RBP18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 OR52Z1P0C646 297 aa18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 EFTUD2Q15029 972 aaKnown RBP eCLIP18.56■□□□□ 0.56
CACNA1A-201ENST00000360228 CDO1Q16878 200 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms