RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 HIBCHQ6NVY1 386 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-202ENST00000359544 LDHAL6AQ6ZMR3 332 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 CFAP73A6NFT4 308 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 PPEF1O14829 653 aaPredicted RBP16.36■□□□□ 0.21
UBAP1-202ENST00000359544 C9orf131Q5VYM1 1079 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 ANKRD40Q6AI12 368 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 CCDC197Q8NCU1 140 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 LPIN2Q92539 896 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 GREM2Q9H772 168 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 KBTBD4Q9NVX7 518 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 SIK3Q9Y2K2 1263 aa16.36■□□□□ 0.21
UBAP1-202ENST00000359544 hCG_1642624A0A1W2PR95 340 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CCT8L1PA6NM43 557 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CES2O00748 559 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 DRD4P21917 467 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 NLRP5P59047 1200 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 VWA3BQ502W6 1294 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 NAALADL2Q58DX5 795 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 ANKRD13CQ8N6S4 541 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CCDC63Q8NA47 563 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 NSMCE1Q8WV22 266 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 TBC1D31Q96DN5 1066 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 INPP4AQ96PE3 977 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CUEDC2Q9H467 287 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 C15orf41Q9Y2V0 281 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 SLC4A4Q9Y6R1 1079 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 LRRC53A6NM62 1247 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 RBAK-RBAKDNI3L0D1 243 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 PDE8AO60658 829 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 ASTE1Q2TB18 679 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-202ENST00000359544 NBPF20Q3BBV1 942 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 RRAGAQ7L523 313 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 ZNF483Q8TF39 744 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CENPTQ96BT3 561 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CHMP6Q96FZ7 201 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 SH3GL3Q99963 347 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 EDEM3Q9BZQ6 932 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 ZNF277Q9NRM2 450 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-202ENST00000359544 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
UBAP1-202ENST00000359544 FAM207AQ9NSI2 230 aaPredicted RBP16.35■□□□□ 0.21
UBAP1-202ENST00000359544 PALMO75781 387 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 PLEKHA8P1O95397 391 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 PHKA1P46020 1223 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 MAP2K1Q02750 393 aaPredicted RBP16.34■□□□□ 0.21
UBAP1-202ENST00000359544 SF3B3Q15393 1217 aaKnown RBP16.34■□□□□ 0.21
UBAP1-202ENST00000359544 MEI1Q5TIA1 1274 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 SPAG5Q96R06 1193 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 ABCB11O95342 1321 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 SLC1A4P43007 532 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 CTSWP56202 376 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 GFPT1Q06210 699 aaPredicted RBP16.34■□□□□ 0.21
UBAP1-202ENST00000359544 MYO1EQ12965 1108 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 BIRC2Q13490 618 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 UAP1Q16222 522 aaPredicted RBP16.34■□□□□ 0.21
UBAP1-202ENST00000359544 DTHD1Q6ZMT9 781 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 NDST4Q9H3R1 872 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 HOMER3Q9NSC5 361 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 NOVA2Q9UNW9 492 aaKnown RBP16.34■□□□□ 0.21
UBAP1-202ENST00000359544 TRPC6Q9Y210 931 aa16.34■□□□□ 0.21
UBAP1-202ENST00000359544 KLHL33A6NCF5 533 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 UBA7P41226 1012 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 ITIH4Q14624 930 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 IFIT1BQ5T764 474 aaKnown RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 PDXDC1Q6P996 788 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 KIRREL3Q8IZU9 778 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 TAF4BQ92750 862 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 STAMBPL1Q96FJ0 436 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 CCSER1Q9C0I3 900 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 NUCKS1Q9H1E3 243 aaKnown RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 CNOT8Q9UFF9 292 aaKnown RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 TMEM59LQ9UK28 342 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 SLC12A4Q9UP95 1085 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 DOCK2Q92608 1830 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 PRKAB2O43741 272 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 DDAH1O94760 285 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 ECHS1P30084 290 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 ERVK-9P63128 1117 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 PDE4DQ08499 809 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 GRAPQ13588 217 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 NAB2Q15742 525 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 MAN2A1Q16706 1144 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 COBLL1Q53SF7 1204 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 TMTC3Q6ZXV5 915 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 KLHL7Q8IXQ5 586 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 VGLL2Q8N8G2 317 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 OR2W6PQ8NHA6 318 aa16.33■□□□□ 0.2
UBAP1-202ENST00000359544 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
UBAP1-202ENST00000359544 UBLCP1Q8WVY7 318 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms