RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SHROOM1Q2M3G4 852 aaPredicted RBP9.47□□□□□ -0.89
RFX3-202ENST00000358730 KLHDC7AQ5VTJ3 777 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 HAUS3Q68CZ6 603 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 C8orf74Q6P047 294 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 RNF10Q8N5U6 811 aaKnown RBP9.47□□□□□ -0.89
RFX3-202ENST00000358730 SYN2Q92777 582 aaPredicted RBP9.47□□□□□ -0.89
RFX3-202ENST00000358730 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.47□□□□□ -0.89
RFX3-202ENST00000358730 GLT8D2Q9H1C3 349 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 KCTD10Q9H3F6 313 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 EMILIN3Q9NT22 766 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 STIM2Q9P246 746 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 ATP6V0A2Q9Y487 856 aa9.47□□□□□ -0.89
RFX3-202ENST00000358730 G3V3G9 751 aa9.46□□□□□ -0.89
RFX3-202ENST00000358730 MARSP56192 900 aaKnown RBP9.46□□□□□ -0.89
RFX3-202ENST00000358730 DCAF8Q5TAQ9 597 aa9.46□□□□□ -0.89
RFX3-202ENST00000358730 FAM133AQ8N9E0 248 aa9.46□□□□□ -0.89
RFX3-202ENST00000358730 MS4A14Q96JA4 679 aa9.46□□□□□ -0.89
RFX3-202ENST00000358730 ZFP91Q96JP5 570 aaPredicted RBP9.46□□□□□ -0.89
RFX3-202ENST00000358730 DNAJC18Q9H819 358 aa9.46□□□□□ -0.89
RFX3-202ENST00000358730 RBM12Q9NTZ6 932 aaKnown RBP9.46□□□□□ -0.89
RFX3-202ENST00000358730 ANKRD31Q8N7Z5 1873 aa9.46□□□□□ -0.89
RFX3-202ENST00000358730 AGPSO00116 658 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 RPS6KA5O75582 802 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 PALMO75781 387 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 EEF2P13639 858 aaKnown RBP9.46□□□□□ -0.9
RFX3-202ENST00000358730 NR2F2P24468 414 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 USP11P51784 963 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 CACNB3P54284 484 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 SLC12A3P55017 1021 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 TCP10Q12799 353 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 ADAM9Q13443 819 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 PRR16Q569H4 304 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
RFX3-202ENST00000358730 ZFPM1Q8IX07 1006 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 SLFN12Q8IYM2 578 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 TBC1D5Q92609 795 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 GJD4Q96KN9 370 aaPredicted RBP9.46□□□□□ -0.9
RFX3-202ENST00000358730 CCDC17Q96LX7 622 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 SIPA1L1O43166 1804 aa9.46□□□□□ -0.9
RFX3-202ENST00000358730 KLRG2A4D1S0 409 aaPredicted RBP9.45□□□□□ -0.9
RFX3-202ENST00000358730 UBAP1LF5GYI3 381 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 CETN3O15182 167 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 FTCDO95954 541 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 CASP5P51878 434 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 EPHB4P54760 987 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 KLHL30Q0D2K2 578 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 ASIC2Q16515 512 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 SLC18A3Q16572 532 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 CFAP221Q4G0U5 840 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 SLFN13Q68D06 897 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 EHD4Q9H223 541 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 DHX36Q9H2U1 1008 aaKnown RBP9.45□□□□□ -0.9
RFX3-202ENST00000358730 KIF13BQ9NQT8 1826 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 PITPNM2Q9BZ72 1349 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 A0A087X0T9 212 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 FRMD3A2A2Y4 597 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 GOLGA6CA6NDK9 693 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 MEIS1O00470 390 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 FAM228BP0C875 321 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 GOLGA6DP0CG33 693 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 KLRC1P26715 233 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 CRKP46108 304 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 ARHGAP4P98171 946 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 KCNH2Q12809 1159 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 PABPC4Q13310 644 aaKnown RBP eCLIP9.45□□□□□ -0.9
RFX3-202ENST00000358730 AP3B2Q13367 1082 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 KIAA0753Q2KHM9 967 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 EDRF1Q3B7T1 1238 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 ARSHQ5FYA8 562 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 FOXR1Q6PIV2 292 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 HHIPL2Q6UWX4 724 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 DCAF4Q8WV16 495 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 GOLGA6AQ9NYA3 693 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 NRXN2Q9P2S2 1712 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 CYP3A7-CYP3A51PA0A087WV96 503 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 MEIS2O14770 477 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 SLC26A4O43511 780 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 CYP3A7P24462 503 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 SNAP25P60880 206 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 NAB2Q15742 525 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 USH1GQ495M9 461 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 LRRC31Q6UY01 552 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.45□□□□□ -0.9
RFX3-202ENST00000358730 CATSPER3Q86XQ3 398 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 ERMNQ8TAM6 284 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 ETNPPLQ8TBG4 499 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 PACSIN1Q9BY11 444 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 GANQ9H2C0 597 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 LCMT1Q9UIC8 334 aa9.45□□□□□ -0.9
RFX3-202ENST00000358730 SPIRE1Q08AE8 756 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 IKQ13123 557 aaPredicted RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 CERKLQ49MI3 558 aaPredicted RBP9.44□□□□□ -0.9
RFX3-202ENST00000358730 EMBQ6PCB8 327 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 SRLQ86TD4 932 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 SFR1Q86XK3 245 aa9.44□□□□□ -0.9
RFX3-202ENST00000358730 ZC3H3Q8IXZ2 948 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms