RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 DOCK5Q9H7D0 1870 aa9.96□□□□□ -0.82
COL4A3BP-202ENST00000357457 GCOM1H8Y6P7 765 aaPredicted RBP9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 HIP1O00291 1037 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 DHX16O60231 1041 aaKnown RBP9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 LGALS2P05162 132 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 POLR2MP0CAP2 368 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 SMIM10L2AP0DMW4 78 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 SMIM10L2BP0DMW5 78 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 CCND2P30279 289 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 HOXA13P31271 388 aaPredicted RBP9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 TRAF1Q13077 416 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 GPM6BQ13491 265 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 AAMPQ13685 434 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 TIGD5Q53EQ6 642 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 FAM26DQ5JW98 314 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 TMEM192Q8IY95 271 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 APBB2Q92870 758 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 INPP4AQ96PE3 977 aaPredicted RBP9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 UBAC1Q9BSL1 405 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 MLXIPQ9HAP2 919 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 PRKAG3Q9UGI9 489 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 ATG2AQ2TAZ0 1938 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 USP34Q70CQ2 3546 aa9.95□□□□□ -0.82
COL4A3BP-202ENST00000357457 FRMPD4Q14CM0 1322 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 SPATA31C2B4DYI2 1134 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 C5orf67F2Z3F1 127 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 NCK2O43639 380 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 CYTH3O43739 400 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 SORBS3O60504 671 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 STAM2O75886 525 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 RB1P06400 928 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 GNAT1P11488 350 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 LTBRP36941 435 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 MRPS9P82933 396 aaKnown RBP9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 SEMA3FQ13275 785 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 NEDD9Q14511 834 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 NBR1Q14596 966 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 TMEM132AQ24JP5 1023 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 CTC1Q2NKJ3 1217 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 TCEAL5Q5H9L2 206 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 METTL7BQ6UX53 244 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 RPAINQ86UA6 219 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 CHD1LQ86WJ1 897 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 YME1L1Q96TA2 773 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 GPR20Q99678 358 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 SENP7Q9BQF6 1050 aa9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
COL4A3BP-202ENST00000357457 TECTAO75443 2155 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 PNMA6FA0A0J9YX94 578 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 H3BQ06 376 aaPredicted RBP9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 UPP2O95045 317 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 LINC00271P0C7V0 271 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 NUCB1Q02818 461 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 ZP2Q05996 745 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 TROAPQ12815 778 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 GRM4Q14833 912 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 ASTLQ6HA08 431 aaPredicted RBP9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 CYB5R4Q7L1T6 521 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 CYFIP1Q7L576 1253 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 FCHSD1Q86WN1 690 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 IL17RAQ96F46 866 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 PIGSQ96S52 555 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 KCNH6Q9H252 994 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 EHMT1Q9H9B1 1298 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 DIAPH3Q9NSV4 1193 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 SETD4Q9NVD3 440 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 FAM50BQ9Y247 325 aa9.93□□□□□ -0.82
COL4A3BP-202ENST00000357457 NOP56O00567 594 aaKnown RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 ATMINO43313 823 aaPredicted RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 DCXO43602 365 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 IGHDP01880 384 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 CHRNA1P02708 482 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 CTSHP09668 335 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 BMPR1AP36894 532 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 GNPTABQ3T906 1256 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 B4GALNT3Q6L9W6 998 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 ALYREFQ86V81 257 aaKnown RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 ADHFE1Q8IWW8 467 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 FIBCD1Q8N539 461 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 CLP1Q92989 425 aaKnown RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 IFIH1Q9BYX4 1025 aaKnown RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 LMAN2LQ9H0V9 348 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 IL25Q9H293 177 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 RWDD1Q9H446 243 aaPredicted RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 RC3H2Q9HBD1 1191 aaKnown RBP9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 TELO2Q9Y4R8 837 aa9.92□□□□□ -0.82
COL4A3BP-202ENST00000357457 NRCAMQ92823 1304 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 ENPP3O14638 875 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 FIBPO43427 364 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 MGAT3Q09327 533 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 SMAD2Q15796 467 aaKnown RBP9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 XRRA1Q6P2D8 792 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 HOMER1Q86YM7 354 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 LMBR1Q8WVP7 490 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 ZNF689Q96CS4 500 aaPredicted RBP9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 RTEL1Q9NZ71 1219 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 ZNF215Q9UL58 517 aaPredicted RBP9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 RWDD3Q9Y3V2 267 aa9.91□□□□□ -0.82
COL4A3BP-202ENST00000357457 LOXHD1Q8IVV2 1947 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms