RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 RASGEF1CQ8N431 466 aa13.28□□□□□ -0.28
SMARCAL1-201ENST00000357276 SCLT1Q96NL6 688 aa13.28□□□□□ -0.28
SMARCAL1-201ENST00000357276 FAM129AQ9BZQ8 928 aa13.28□□□□□ -0.28
SMARCAL1-201ENST00000357276 TRIM37O94972 964 aa13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 DDX42Q86XP3 938 aaKnown RBP eCLIP13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 CHMP6Q96FZ7 201 aa13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 PACSIN1Q9BY11 444 aa13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 BARHL2Q9NY43 387 aa13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 SWAP70Q9UH65 585 aa13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 NOVA2Q9UNW9 492 aaKnown RBP13.27□□□□□ -0.28
SMARCAL1-201ENST00000357276 MYMKA6NI61 221 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 PHF20L1A8MW92 1017 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 USP17L12C9JPN9 530 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 USP17L21D6R901 530 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 F8VZ95 297 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 ASAP2O43150 1006 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 SART1O43290 800 aaKnown RBP13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 ALADP13716 330 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 MAGOHP61326 146 aaKnown RBP13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 GRIK3Q13003 919 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 ITIH4Q14624 930 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 MAGOHBQ96A72 148 aaKnown RBP13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 LRRC4CQ9HCJ2 640 aa13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
SMARCAL1-201ENST00000357276 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 A0A0G2JS52 829 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 CCDC188H7C350 402 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 KIF3CO14782 793 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 SSBP05455 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 CLNS1AP54105 237 aaKnown RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 MARSP56192 900 aaKnown RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 POU5F1Q01860 360 aaKnown RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 HLTFQ14527 1009 aaKnown RBP eCLIP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 GRM4Q14833 912 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 E2F5Q15329 346 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 ACCSLQ4AC99 568 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 TDRD12Q587J7 1177 aaKnown RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 GPIHBP1Q8IV16 184 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 PIGBQ92521 554 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 TBC1D5Q92609 795 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 PSMD1Q99460 953 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 TRIM6Q9C030 488 aaPredicted RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 MAD2L2Q9UI95 211 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 MAST2Q6P0Q8 1798 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 PPFIA2O75334 1257 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 GRB10Q13322 594 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 C10orf76Q5T2E6 689 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 CYTH3O43739 400 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 RPS6KA1Q15418 735 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 DDB1Q16531 1140 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 SBK1Q52WX2 424 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 FAM47AQ5JRC9 791 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 DPY19L2P1Q6NXN4 242 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 SLFN11Q7Z7L1 901 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 CEP120Q8N960 986 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 ATXN2LQ8WWM7 1075 aaKnown RBP13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.26□□□□□ -0.295e-6■■■□□ 16.3
SMARCAL1-201ENST00000357276 SLITRK6Q9H5Y7 841 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 CCDC134Q9H6E4 229 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 BATF3Q9NR55 127 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 STXBP5LQ9Y2K9 1186 aa13.26□□□□□ -0.29
SMARCAL1-201ENST00000357276 BACH1O14867 736 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 ORC2Q13416 577 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 PNMA5Q96PV4 448 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 EPB41L4BQ9H329 900 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 NLRC4Q9NPP4 1024 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 KCNK3O14649 394 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 EIF3BP55884 814 aaKnown RBP13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 PSMD2Q13200 908 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 ZNF268Q14587 947 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 DGKHQ86XP1 1220 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 GANQ9H2C0 597 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 ADAM7Q9H2U9 754 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 IL17RBQ9NRM6 502 aa13.25□□□□□ -0.29
SMARCAL1-201ENST00000357276 PGRMC1O00264 195 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 CPLX4Q7Z7G2 160 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 CCDC197Q8NCU1 140 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 DCP1AQ9NPI6 582 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 COL4A3BPQ9Y5P4 624 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 MMP13P45452 471 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 NT5C2P49902 561 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 DNA2P51530 1060 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 ZC3H3Q8IXZ2 948 aaKnown RBP13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 UBLCP1Q8WVY7 318 aaPredicted RBP13.24□□□□□ -0.29
SMARCAL1-201ENST00000357276 TAF4BQ92750 862 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms