RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 EIF4A3P38919 411 aaKnown RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 VPS41P49754 854 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 KPNA2P52292 529 aaKnown RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 TSGA10IPQ3SY00 556 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 BSPRYQ5W0U4 402 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 HAUS8Q9BT25 410 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 SAMSN1Q9NSI8 373 aaKnown RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 GCNT4Q9P109 453 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 MID2Q9UJV3 735 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 BCS1LQ9Y276 419 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 CLRN2A0PK11 232 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 MIF4GDA9UHW6 222 aaKnown RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 CCND2P30279 289 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 SLFN12LQ6IEE8 588 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 CEP120Q8N960 986 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 DCPSQ96C86 337 aaKnown RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 ISCA1Q9BUE6 129 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 KMT5BQ4FZB7 885 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 SPICE1Q8N0Z3 855 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 HVCN1Q96D96 273 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 SEPT9Q9UHD8 586 aaPredicted RBP12.72□□□□□ -0.37
COL9A1-202ENST00000357250 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
COL9A1-202ENST00000357250 TOB2Q14106 344 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-202ENST00000357250 DBN1Q16643 649 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 GBP5Q96PP8 586 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 ACTR5Q9H9F9 607 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-202ENST00000357250 CACYBPQ9HB71 228 aaKnown RBP12.71□□□□□ -0.37
COL9A1-202ENST00000357250 TTLL3Q9Y4R7 772 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 TAF6LQ9Y6J9 622 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 PREX1Q8TCU6 1659 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 ARHGAP42A6NI28 874 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 MCF2LO15068 1137 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 CYP2D6P10635 497 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 CACNB3P54284 484 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 YWHAGP61981 247 aaKnown RBP eCLIP12.71□□□□□ -0.37
COL9A1-202ENST00000357250 RSPH3Q86UC2 560 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 NEK9Q8TD19 979 aa12.71□□□□□ -0.37
COL9A1-202ENST00000357250 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
COL9A1-202ENST00000357250 IPO5O00410 1097 aaKnown RBP12.71□□□□□ -0.38
COL9A1-202ENST00000357250 MECOMQ03112 1051 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 PSMD6Q15008 389 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 PDIA6Q15084 440 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 KRT31Q15323 416 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 OSBPL5Q9H0X9 879 aaPredicted RBP12.71□□□□□ -0.38
COL9A1-202ENST00000357250 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 SCINQ9Y6U3 715 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 AGLP35573 1532 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 DIP2AQ14689 1571 aa12.71□□□□□ -0.38
COL9A1-202ENST00000357250 TXNDC9O14530 226 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 HGSO14964 777 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 LDHAP00338 332 aaKnown RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 KRT3P12035 628 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 CDK8P49336 464 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 ATG9AQ7Z3C6 839 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 NCAPG2Q86XI2 1143 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 CEP170P1Q96L14 293 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 KIAA1586Q9HCI6 787 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 DIP2BQ9P265 1576 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 A0A087WUV0 522 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 PODXLO00592 558 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 ENC1O14682 589 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 PSAPP07602 524 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 SNCBQ16143 134 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 PFKFB3Q16875 520 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 DNAJC24Q6P3W2 148 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 TBC1D10CQ8IV04 446 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 PARD6BQ9BYG5 372 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 ANO3Q9BYT9 981 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 ANAPC5Q9UJX4 755 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 STK38LQ9Y2H1 464 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 IQSEC2Q5JU85 1478 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 AFF2P51816 1311 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 LGALS16A8MUM7 142 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 OATP04181 439 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 NPR1P16066 1061 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 SMYD4Q8IYR2 804 aaPredicted RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 PRPF31Q8WWY3 499 aaKnown RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 ARHGEF1Q92888 912 aaKnown RBP12.7□□□□□ -0.38
COL9A1-202ENST00000357250 PGBD1Q96JS3 809 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 REREQ9P2R6 1566 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 USP17L3A6NCW0 530 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 USP17L4A6NCW7 530 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 USP17L1Q7RTZ2 530 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 RFX6Q8HWS3 928 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 MINPP1Q9UNW1 487 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 RIPOR2Q9Y4F9 1068 aa12.7□□□□□ -0.38
COL9A1-202ENST00000357250 MMP10P09238 476 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 PDE1BQ01064 536 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 CCDC93Q567U6 631 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
COL9A1-202ENST00000357250 FAM133AQ8N9E0 248 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 FAM20AQ96MK3 541 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 RPS6KC1Q96S38 1066 aa12.69□□□□□ -0.38
COL9A1-202ENST00000357250 CEP72Q9P209 647 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms