RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
SHANK2-202ENST00000357171 ORC3Q9UBD5 711 aaPredicted RBP15.45■□□□□ 0.06
SHANK2-202ENST00000357171 SLC9A2Q9UBY0 812 aa15.45■□□□□ 0.06
SHANK2-202ENST00000357171 EMSYQ7Z589 1322 aa15.45■□□□□ 0.06
SHANK2-202ENST00000357171 CYP3A7-CYP3A51PA0A087WV96 503 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 IGKV6D-21A0A0A0MT36 114 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 CYP3A7P24462 503 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 ZNF76P36508 570 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 ADAM17P78536 824 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 RASIP1Q5U651 963 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 GPR153Q6NV75 609 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 PLA2G4DQ86XP0 818 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 TRIM50Q86XT4 487 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 CAGE1Q8TC20 777 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 WASF1Q92558 559 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 DHX38Q92620 1227 aaKnown RBP15.44■□□□□ 0.06
SHANK2-202ENST00000357171 MBOAT7Q96N66 472 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 PCYT2Q99447 389 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 IL23AQ9NPF7 189 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 CHD9Q3L8U1 2897 aa15.44■□□□□ 0.06
SHANK2-202ENST00000357171 IPO5O00410 1097 aaKnown RBP15.43■□□□□ 0.06
SHANK2-202ENST00000357171 DTNBO60941 627 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 SMIM10L2AP0DMW4 78 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 SMIM10L2BP0DMW5 78 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 XBP1P17861 261 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 PTK7Q13308 1070 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 BFSP2Q13515 415 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 RABEP1Q15276 862 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 TRIM71Q2Q1W2 868 aaKnown RBP15.43■□□□□ 0.06
SHANK2-202ENST00000357171 TMEM240Q5SV17 173 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 MOXD1Q6UVY6 613 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 SERINC5Q86VE9 423 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■□□□□ 9.7
SHANK2-202ENST00000357171 SDF4Q9BRK5 362 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 LLPHQ9BRT6 129 aaKnown RBP15.43■□□□□ 0.06
SHANK2-202ENST00000357171 RNPEPQ9H4A4 650 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 GJB4Q9NTQ9 266 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 PKD2L1Q9P0L9 805 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 ZNF215Q9UL58 517 aaPredicted RBP15.43■□□□□ 0.06
SHANK2-202ENST00000357171 KCNJ14Q9UNX9 436 aa15.43■□□□□ 0.06
SHANK2-202ENST00000357171 EYSQ5T1H1 3165 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 CHD7Q9P2D1 2997 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 JAK2O60674 1132 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 SLC34A2O95436 690 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 CCNE2O96020 404 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 IQCF3P0C7M6 154 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 CCL23P55773 120 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 CHMP4BP1P59074 171 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 ACTR2P61160 394 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 ZNF200P98182 395 aaPredicted RBP15.42■□□□□ 0.06
SHANK2-202ENST00000357171 SP4Q02446 784 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 TRAF7Q6Q0C0 670 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 AFAP1L1Q8TED9 768 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 TNFRSF25Q93038 417 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 ZSCAN31Q96LW9 406 aaPredicted RBP15.42■□□□□ 0.06
SHANK2-202ENST00000357171 TBC1D32Q96NH3 1257 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 SMARCAD1Q9H4L7 1026 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 SH2B1Q9NRF2 756 aaPredicted RBP15.42■□□□□ 0.06
SHANK2-202ENST00000357171 TBC1D22BQ9NU19 505 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 ERAP1Q9NZ08 941 aa15.42■□□□□ 0.06
SHANK2-202ENST00000357171 PFKMP08237 780 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 RFC2P35250 354 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 GPNMBQ14956 572 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 Q4G0T1 1027 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 PRR16Q569H4 304 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 UTP14CQ5TAP6 766 aaKnown RBP15.41■□□□□ 0.06
SHANK2-202ENST00000357171 PSRC1Q6PGN9 363 aaPredicted RBP15.41■□□□□ 0.06
SHANK2-202ENST00000357171 ABHD15Q6UXT9 468 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 PLPPR4Q7Z2D5 763 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 KRT25Q7Z3Z0 450 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 WNT8BQ93098 351 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 SCLYQ96I15 445 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 LRCH3Q96II8 777 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 ZNF577Q9BSK1 485 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 NOD1Q9Y239 953 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 NRCAMQ92823 1304 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 SIP14410 1827 aa15.41■□□□□ 0.06
SHANK2-202ENST00000357171 GBF1Q92538 1859 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 C17orf102A2RUQ5 167 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 MSH4O15457 936 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 CKBP12277 381 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 NONOQ15233 471 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHANK2-202ENST00000357171 ZNF746Q6NUN9 644 aaPredicted RBP15.4■□□□□ 0.06
SHANK2-202ENST00000357171 ZNF365Q70YC5 407 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 RPUSD2Q8IZ73 545 aaKnown RBP15.4■□□□□ 0.06
SHANK2-202ENST00000357171 CCDC155Q8N6L0 562 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 OXER1Q8TDS5 423 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 LMBR1Q8WVP7 490 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 HERVK_113Q902F9 699 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 SLC5A5Q92911 643 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 UPF2Q9HAU5 1272 aaKnown RBP15.4■□□□□ 0.06
SHANK2-202ENST00000357171 EVPLQ92817 2033 aa15.4■□□□□ 0.06
SHANK2-202ENST00000357171 TREHO43280 583 aa15.39■□□□□ 0.05
SHANK2-202ENST00000357171 PARNO95453 639 aaKnown RBP15.39■□□□□ 0.05
SHANK2-202ENST00000357171 ACRP10323 421 aa15.39■□□□□ 0.05
SHANK2-202ENST00000357171 GNAT1P11488 350 aa15.39■□□□□ 0.05
SHANK2-202ENST00000357171 SELPP16109 830 aa15.39■□□□□ 0.05
SHANK2-202ENST00000357171 SLC26A2P50443 739 aa15.39■□□□□ 0.05
SHANK2-202ENST00000357171 B3GNT9Q6UX72 402 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms