RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SEPT2Q15019 361 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 TMEM179Q6ZVK1 233 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 LINC00301Q8NCQ3 95 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 GOLGA8IPA6NC78 632 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 GOLGA8JA6NMD2 632 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 CYP4F22Q6NT55 531 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 ATP7BP35670 1465 aa19.5■□□□□ 0.71
COL18A1-202ENST00000355480 CLGNO14967 610 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 GH2P01242 217 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 MYL3P08590 195 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 STX1BP61266 288 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 APBA1Q02410 837 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 RC3H1Q5TC82 1133 aaKnown RBP19.49■□□□□ 0.71
COL18A1-202ENST00000355480 PPP1R13BQ96KQ4 1090 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 GCNAQ96QF7 691 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 RWDD2AQ9UIY3 292 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 UGGT1Q9NYU2 1555 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 UNC13AQ9UPW8 1703 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 K7ERI5 159 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 IKBKBO14920 756 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 CDC23Q9UJX2 597 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 HIP1RO75146 1068 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 ASNSP08243 561 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 EPHB1P54762 984 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 PSMD2Q13200 908 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 EFCAB13Q8IY85 973 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 CAPN7Q9Y6W3 813 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 ARAP3Q8WWN8 1544 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 ADCY1Q08828 1119 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 SPDYE1Q8NFV5 336 aaPredicted RBP19.49■□□□□ 0.71
COL18A1-202ENST00000355480 SPZ1Q9BXG8 430 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 PCDHB6Q9Y5E3 794 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 SERPINB6P35237 376 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 TTLL11Q8NHH1 800 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 BCAS4Q8TDM0 211 aa19.49■□□□□ 0.71
COL18A1-202ENST00000355480 PGRMC1O00264 195 aaKnown RBP19.48■□□□□ 0.71
COL18A1-202ENST00000355480 IFNAR2P48551 515 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 CACNB3P54284 484 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 PLTPP55058 493 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 NFX1Q12986 1120 aaKnown RBP19.48■□□□□ 0.71
COL18A1-202ENST00000355480 KCTD16Q68DU8 428 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 GDAP1Q8TB36 358 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 MICAL1Q8TDZ2 1067 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 PIM2Q9P1W9 311 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 JRKLQ9Y4A0 524 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 MSH2P43246 934 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
COL18A1-202ENST00000355480 ROBO2Q9HCK4 1378 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 LRRD1A4D1F6 860 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 TTC4O95801 387 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 IL1RL1Q01638 556 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 SLC12A1Q13621 1099 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 INTS9Q9NV88 658 aaKnown RBP19.48■□□□□ 0.71
COL18A1-202ENST00000355480 KIF21AQ7Z4S6 1674 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 WDR64B1ANS9 1081 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 SESN3P58005 492 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 ZSCAN26Q16670 478 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 SLC8A2Q9UPR5 921 aa19.48■□□□□ 0.71
COL18A1-202ENST00000355480 BNIP3LO60238 219 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 FTCDO95954 541 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 CCNE1P24864 410 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 COG7P83436 770 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 C11orf57Q6ZUT1 292 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-202ENST00000355480 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 SRPRBQ9Y5M8 271 aaKnown RBP19.47■□□□□ 0.71
COL18A1-202ENST00000355480 PDZD8Q8NEN9 1154 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 DDX27Q96GQ7 796 aaKnown RBP19.47■□□□□ 0.71
COL18A1-202ENST00000355480 EPB41L5Q9HCM4 733 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 TLK1Q9UKI8 766 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 ALCAMQ13740 583 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 SH3RF3Q8TEJ3 882 aaPredicted RBP19.47■□□□□ 0.71
COL18A1-202ENST00000355480 IRAK4Q9NWZ3 460 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 GOLGA8QA0A0J9YX86 632 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 GOLGA8OA6NCC3 632 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 GOLGA8NF8WBI6 632 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 CDC25BP30305 580 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 BHMT2Q9H2M3 363 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 MED4Q9NPJ6 270 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 THAP9Q9H5L6 903 aa19.47■□□□□ 0.71
COL18A1-202ENST00000355480 PEX3P56589 373 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 RCN2Q14257 317 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 NRBP1Q9UHY1 535 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 CFAP74Q9C0B2 1584 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 MOCS3O95396 460 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 LIFRP42702 1097 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 CRKP46108 304 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 TTC19Q6DKK2 380 aaPredicted RBP19.46■□□□□ 0.71
COL18A1-202ENST00000355480 SLFN12LQ6IEE8 588 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 A0A087WWV3 80 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 MGEA5O60502 916 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 TMED2Q15363 201 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 C2orf69Q8N8R5 385 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 OR6B3Q8NGW1 331 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 ZBED2Q9BTP6 218 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 Q9H521 79 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 ABCF3Q9NUQ8 709 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 ATP8A1Q9Y2Q0 1164 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 ZNF18P17022 549 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 TCP11X2Q5H9J9 407 aa19.46■□□□□ 0.71
COL18A1-202ENST00000355480 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms