RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 CCDC142Q17RM4 750 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 MCTP2Q6DN12 878 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 DHX32Q7L7V1 743 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 PLA2G4DQ86XP0 818 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 ZSCAN18Q8TBC5 510 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 POLR3EQ9NVU0 708 aa12.38□□□□□ -0.43
NUDCD3-202ENST00000355451 EPB42P16452 691 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 CATSPER3Q86XQ3 398 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 USE1Q9NZ43 259 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 CAPN7Q9Y6W3 813 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 PASKQ96RG2 1323 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 CCDC151A5D8V7 595 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 CLTAP09496 248 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 VCAM1P19320 739 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 BTBD8Q5XKL5 378 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 PPIEQ9UNP9 301 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 JRKLQ9Y4A0 524 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 MYO1FO00160 1098 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 PJA2O43164 708 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 COBLO75128 1261 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 EHHADHQ08426 723 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 TTC23Q5W5X9 447 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 FAM129AQ9BZQ8 928 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 FHDC1Q9C0D6 1143 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 MED4Q9NPJ6 270 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 SNX5Q9Y5X3 404 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 MAGEB5Q9BZ81 275 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 DBNLQ9UJU6 430 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 PRDM1O75626 825 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 CDO1Q16878 200 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 ZC3H7BQ9UGR2 993 aaKnown RBP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 PLCH2O75038 1416 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 IKBKBO14920 756 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 GFAPP14136 432 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 TUBB2AQ13885 445 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 TUBB2BQ9BVA1 445 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 DTNAQ9Y4J8 743 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 ABCC11Q96J66 1382 aa12.37□□□□□ -0.43
NUDCD3-202ENST00000355451 DYRK3O43781 588 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 KPNA1P52294 538 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 POSTNQ15063 836 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 MFSD14CQ5VZR4 134 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 FAM89AQ96GI7 184 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 IL9RQ01113 521 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 C11orf95C9JLR9 678 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 LUC7L3O95232 432 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 FYNP06241 537 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 ALFQ53S48 1182 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 ITPRIPL1Q6GPH6 555 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 KSR2Q6VAB6 950 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 SIX5Q8N196 739 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 TMEM245Q9H330 911 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 GTF2A1LQ9UNN4 478 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 AKNAQ7Z591 1439 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 PRR23AA6NEV1 266 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 CAPN1P07384 714 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 USP14P54578 494 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 TAS2R42Q7RTR8 314 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 C11orf96Q7Z7L8 435 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 DDX50Q9BQ39 737 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 MYLK2Q9H1R3 596 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 SP110Q9HB58 689 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 KMT5AQ9NQR1 393 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 HNRNPCP07910 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 MYL7Q01449 175 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 GRAMD4Q6IC98 578 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 TMX3Q96JJ7 454 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 TAF5LO75529 589 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 KRT14P02533 472 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 ZNF568Q3ZCX4 644 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 PHKBQ93100 1093 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 KCNH3Q9ULD8 1083 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 ATP8A1Q9Y2Q0 1164 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 TECP42680 631 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 TRIM62Q9BVG3 475 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 SPATA16Q9BXB7 569 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-202ENST00000355451 P4HA2O15460 535 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 LRRC47Q8N1G4 583 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 HSPH1Q92598 858 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 TMEM87BQ96K49 555 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 PARVBQ9HBI1 364 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 PEX1O43933 1283 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 PEX19P40855 299 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 UHMK1Q8TAS1 419 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 NCKAP1LP55160 1127 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 ABCB5Q2M3G0 1257 aa12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-202ENST00000355451 MFSD1Q9H3U5 465 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms