RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TTLL6Q8N841 843 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 TTLL11Q8NHH1 800 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 HEXIM1O94992 359 aaKnown RBP14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SLC12A1Q13621 1099 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 HLFQ16534 295 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 PAGE5Q96GU1 130 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 COA1Q9GZY4 146 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SOWAHDA6NJG2 315 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SASH1O94885 1247 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 ECEL1O95672 775 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 GH2P01242 217 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SERPINB6P35237 376 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 MSTO1Q9BUK6 570 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 RPF1Q9H9Y2 349 aaKnown RBP14.3□□□□□ -0.12
SCN8A-202ENST00000355133 FIS1Q9Y3D6 152 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 CDC25BP30305 580 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 EIF4A3P38919 411 aaKnown RBP14.3□□□□□ -0.12
SCN8A-202ENST00000355133 RCN2Q14257 317 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 TMED2Q15363 201 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 RTKN2Q8IZC4 609 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 VCX3AQ9NNX9 186 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 ABCF3Q9NUQ8 709 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SPTLC3Q9NUV7 552 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 ATP8A1Q9Y2Q0 1164 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 ARAP3Q8WWN8 1544 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 IKBKBO14920 756 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SEC31AO94979 1220 aaKnown RBP14.3□□□□□ -0.12
SCN8A-202ENST00000355133 MYL3P08590 195 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 CYP2D6P10635 497 aa14.3□□□□□ -0.12
SCN8A-202ENST00000355133 SRPRBQ9Y5M8 271 aaKnown RBP14.3□□□□□ -0.12
SCN8A-202ENST00000355133 CLGNO14967 610 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 RNF207Q6ZRF8 634 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 MASTLQ96GX5 879 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 NHEJ1Q9H9Q4 299 aaPredicted RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 MCAMP43121 646 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 IL9RQ01113 521 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 IQCB1Q15051 598 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 GAS2L3Q86XJ1 694 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 INTS9Q9NV88 658 aaKnown RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 BNIP3LO60238 219 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 ANXA13P27216 316 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 LRRC43Q8N309 656 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 DDX27Q96GQ7 796 aaKnown RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 MRPL47Q9HD33 250 aaKnown RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 UGGT1Q9NYU2 1555 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 PBRM1Q86U86 1689 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 ATP7BP35670 1465 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 LRRD1A4D1F6 860 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 PGRMC1O00264 195 aaKnown RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 PRPSAP2O60256 369 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 MSH2P43246 934 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 IRX4P78413 519 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 THOC5Q13769 683 aaKnown RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
SCN8A-202ENST00000355133 LRGUKQ96M69 825 aa14.29□□□□□ -0.12
SCN8A-202ENST00000355133 ZNF233A6NK53 670 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 OPHN1O60890 802 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 HIP1RO75146 1068 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 SLFNL1Q499Z3 407 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 BHMT2Q9H2M3 363 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 CCNE1P24864 410 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 PEX3P56589 373 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 TCP11X2Q5H9J9 407 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 HVCN1Q96D96 273 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 FAM81BQ96LP2 452 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 ERVK-7P63135 1459 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 ATP8B3O60423 1300 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 PIGOQ8TEQ8 1089 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 THAP9Q9H5L6 903 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 USP17L5A8MUK1 530 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 CLTAP09496 248 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 ZNF18P17022 549 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 PDE1CQ14123 709 aaPredicted RBP14.28□□□□□ -0.12
SCN8A-202ENST00000355133 ZKSCAN8Q15776 578 aaPredicted RBP14.28□□□□□ -0.12
SCN8A-202ENST00000355133 CDO1Q16878 200 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 RCOR1Q9UKL0 485 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 K7ERI5 159 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 FAM83BQ5T0W9 1011 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 RNF139Q8WU17 664 aa14.28□□□□□ -0.12
SCN8A-202ENST00000355133 MYL1P05976 194 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 CRKP46108 304 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 PDZD8Q8NEN9 1154 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 GBP5Q96PP8 586 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 TBK1Q9UHD2 729 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 PRR36Q9H6K5 1346 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 ZNF500O60304 480 aaPredicted RBP14.27□□□□□ -0.12
SCN8A-202ENST00000355133 NFX1Q12986 1120 aaKnown RBP14.27□□□□□ -0.12
SCN8A-202ENST00000355133 PSMD2Q13200 908 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 TMEM179Q6ZVK1 233 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 THNSL1Q8IYQ7 743 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 SDCCAG3Q96C92 435 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 ANKARQ7Z5J8 1434 aa14.27□□□□□ -0.12
SCN8A-202ENST00000355133 SLCO1A2P46721 670 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 GDAP1Q8TB36 358 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 ZWILCHQ9H900 591 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms