RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 VWA3BQ502W6 1294 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 IWS1Q96ST2 819 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 CYTH3O43739 400 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 PRELPP51888 382 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 HDLBPQ00341 1268 aaKnown RBP13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 COASYQ13057 564 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 KLHL7Q8IXQ5 586 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 RAD54LQ92698 747 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 FHDC1Q9C0D6 1143 aaPredicted RBP13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 NDST4Q9H3R1 872 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 ACAD9Q9H845 621 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 SPC25Q9HBM1 224 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 STK4Q13043 487 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 DNAJC21Q5F1R6 531 aaKnown RBP13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 MIS18BP1Q6P0N0 1132 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 UNC13DQ70J99 1090 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 GSTA5Q7RTV2 222 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 THNSL1Q8IYQ7 743 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 CDHR1Q96JP9 859 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM20AQ96MK3 541 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 DNAI2Q9GZS0 605 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 PNMA2Q9UL42 364 aa13.53□□□□□ -0.24
PCDHB11-201ENST00000354757 RPS6P62753 249 aaKnown RBP13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 MAP3K9P80192 1104 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 TFAMQ00059 246 aaKnown RBP13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 MAN2A1Q16706 1144 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 TCP11X2Q5H9J9 407 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 MAP1SQ66K74 1059 aaPredicted RBP13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 ZNF354CQ86Y25 554 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 NOX5Q96PH1 765 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 TEX13BQ9BXU2 312 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 TRIM9Q9C026 710 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 FAM107BQ9H098 131 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 BCL9LQ86UU0 1499 aa13.52□□□□□ -0.24
PCDHB11-201ENST00000354757 CSPG5O95196 566 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 GNA14O95837 355 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 TMEM191BP0C7N4 346 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 EEF1GP26641 437 aaKnown RBP13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 TGFB2P61812 414 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 LMBR1Q8WVP7 490 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 KIFAP3Q92845 792 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 NMT1P30419 496 aaKnown RBP13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 GTF2A1P52655 376 aaPredicted RBP13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 ETF1P62495 437 aaKnown RBP13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 CEP112Q8N8E3 955 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 PLVAPQ9BX97 442 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 RSPH14Q9UHP6 348 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 ROBO1Q9Y6N7 1651 aa13.52□□□□□ -0.25
PCDHB11-201ENST00000354757 SHTN1A0MZ66 631 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 WDR64B1ANS9 1081 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 K7ERI5 159 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 WDR46O15213 610 aaKnown RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 PSAPP07602 524 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 TMOD1P28289 359 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 PTPAQ15257 358 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 TERF2Q15554 542 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 METTL14Q9HCE5 456 aaKnown RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 CAPN2P17655 700 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 ACTN2P35609 894 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 DCUN1D2Q6PH85 259 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 VSTM4Q8IW00 320 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 RASSF4Q9H2L5 321 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 C1orf112Q9NSG2 853 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 GCNT4Q9P109 453 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 NXF1Q9UBU9 619 aaKnown RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 FAM198AQ9UFP1 575 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 IQCA1LA6NCM1 817 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 GFPT2O94808 682 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 PSMC2P35998 433 aaKnown RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 NFX1Q12986 1120 aaKnown RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 NAA35Q5VZE5 725 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 IPO4Q8TEX9 1081 aaKnown RBP13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 KCNF1Q9H3M0 494 aa13.51□□□□□ -0.25
PCDHB11-201ENST00000354757 TLDC2A0PJX2 215 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 M0QZ92 97 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 NR3C2P08235 984 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 QARSP47897 775 aaKnown RBP13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 USP11P51784 963 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 HOOK3Q86VS8 718 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 ADAMTS1Q9UHI8 967 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 MYL7Q01449 175 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 DGKZQ13574 1117 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 PPP1R18Q6NYC8 613 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 FBXO38Q6PIJ6 1188 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 PEX26Q7Z412 305 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 DHX40Q8IX18 779 aaKnown RBP13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 PROCA1Q8NCQ7 364 aaPredicted RBP13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 CCDC114Q96M63 670 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 TAAR1Q96RJ0 339 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 ADPGKQ9BRR6 497 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 MYMKA6NI61 221 aa13.5□□□□□ -0.25
PCDHB11-201ENST00000354757 NFIBO00712 420 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms