RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 SEPT9Q9UHD8 586 aaPredicted RBP13.3□□□□□ -0.28
TRPM3-201ENST00000354500 DAAM1Q9Y4D1 1078 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 CD2APQ9Y5K6 639 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 DLC1Q96QB1 1528 aa13.3□□□□□ -0.28
TRPM3-201ENST00000354500 F5H6K3 240 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 MYO1FO00160 1098 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 KLRC3Q07444 240 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 COASYQ13057 564 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF211Q13398 564 aaPredicted RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 GRM4Q14833 912 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 C6orf163Q5TEZ5 329 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 ADD3Q9UEY8 706 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 FAM169AQ9Y6X4 670 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 CLTCQ00610 1675 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 POC1B-GALNT4F8VUJ3 575 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 CRKP46108 304 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 POLGP54098 1239 aaPredicted RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 ARHGAP4P98171 946 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 MKRN4PQ13434 485 aaPredicted RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 PGRMC1O00264 195 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 EPHB4P54760 987 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 PEX3P56589 373 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 LRRC63Q05C16 580 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 MTMR3Q13615 1198 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 TTLL6Q8N841 843 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 BANK1Q8NDB2 785 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF668Q96K58 619 aaPredicted RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 ZC3H13Q5T200 1668 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 THAP12O43422 761 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 SERPING1P05155 500 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 MYL1P05976 194 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 TRIM49P0CI25 452 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 TRIM49CP0CI26 452 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 ATP2A2P16615 1042 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 GCLMP48507 274 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 PTPAQ15257 358 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 KCNB2Q92953 911 aa13.29□□□□□ -0.28
TRPM3-201ENST00000354500 DDX47Q9H0S4 455 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 NOVA2Q9UNW9 492 aaKnown RBP13.29□□□□□ -0.28
TRPM3-201ENST00000354500 FGGP02679 453 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 HSPA1LP34931 641 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
TRPM3-201ENST00000354500 TROAPQ12815 778 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 ZNF394Q53GI3 561 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 CACNA2D3Q8IZS8 1091 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 MMS19Q96T76 1030 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 TRIM6Q9C030 488 aaPredicted RBP13.28□□□□□ -0.28
TRPM3-201ENST00000354500 TRPC6Q9Y210 931 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 GOLGA8KD6RF30 607 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 GOLGA8SH3BPF8 625 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 CLTAP09496 248 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 FERP16591 822 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 GGCXP38435 758 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 NSFP46459 744 aaKnown RBP13.28□□□□□ -0.28
TRPM3-201ENST00000354500 MTERF2Q49AM1 385 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 SEPT14Q6ZU15 432 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 DCPSQ96C86 337 aaKnown RBP13.28□□□□□ -0.28
TRPM3-201ENST00000354500 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 NACC1Q96RE7 527 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 SMC6Q96SB8 1091 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 A0A1B0GTH6 734 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 NPR1P16066 1061 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 CHRNA5P30532 468 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 MXI1P50539 228 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 DPYDQ12882 1025 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 DCAF15Q66K64 600 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.28□□□□□ -0.28
TRPM3-201ENST00000354500 CCDC89Q8N998 374 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 NEDD1Q8NHV4 660 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 NT5C1BQ96P26 610 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 TRIM7Q9C029 511 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 COA1Q9GZY4 146 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
TRPM3-201ENST00000354500 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.28
TRPM3-201ENST00000354500 CD58P19256 250 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 ALDH3A1P30838 453 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 TAOK1Q7L7X3 1001 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 ADGRA1Q86SQ6 560 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 ARHGEF2Q92974 986 aaKnown RBP13.27□□□□□ -0.28
TRPM3-201ENST00000354500 SNX24Q9Y343 169 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 PXDNQ92626 1479 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 ORC4O43929 436 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 NTSR2O95665 410 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 DYNLT1P63172 113 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 NR1I3Q14994 352 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.28
TRPM3-201ENST00000354500 STK24Q9Y6E0 443 aa13.27□□□□□ -0.28
TRPM3-201ENST00000354500 DKC1O60832 514 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRPM3-201ENST00000354500 GYPCP04921 128 aa13.27□□□□□ -0.29
TRPM3-201ENST00000354500 FAM47CQ5HY64 1035 aa13.27□□□□□ -0.29
TRPM3-201ENST00000354500 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.29
TRPM3-201ENST00000354500 FOXP4Q8IVH2 680 aaPredicted RBP13.27□□□□□ -0.29
TRPM3-201ENST00000354500 NOA1Q8NC60 698 aaKnown RBP13.27□□□□□ -0.29
TRPM3-201ENST00000354500 RNF169Q8NCN4 708 aa13.27□□□□□ -0.29
TRPM3-201ENST00000354500 LINC00116Q8NCU8 138 aa13.27□□□□□ -0.29
TRPM3-201ENST00000354500 RAD54LQ92698 747 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms