RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 FAM26DQ5JW98 314 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 POF1BQ8WVV4 589 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 GPKOWQ92917 476 aaPredicted RBP eCLIP18.45■□□□□ 0.54
DDX55-202ENST00000354291 ZNF689Q96CS4 500 aaPredicted RBP18.45■□□□□ 0.54
DDX55-202ENST00000354291 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 ZKSCAN3Q9BRR0 538 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 BCAS3Q9H6U6 928 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 RC3H2Q9HBD1 1191 aaKnown RBP18.45■□□□□ 0.54
DDX55-202ENST00000354291 ZBTB47Q9UFB7 747 aaPredicted RBP18.45■□□□□ 0.54
DDX55-202ENST00000354291 SUPT16HQ9Y5B9 1047 aaKnown RBP18.45■□□□□ 0.54
DDX55-202ENST00000354291 RALGAPA2Q2PPJ7 1873 aa18.45■□□□□ 0.54
DDX55-202ENST00000354291 PRR23AA6NEV1 266 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 GALR2O43603 387 aaPredicted RBP18.44■□□□□ 0.54
DDX55-202ENST00000354291 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 GLP2RO95838 553 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 ID4P47928 161 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 PTPN21Q16825 1174 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 KLHL23Q8NBE8 558 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 MICAL1Q8TDZ2 1067 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 P2RX5Q93086 422 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 RIPOR3Q96MK2 946 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 TLE6Q9H808 572 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 PCDHGC5Q9Y5F6 944 aa18.44■□□□□ 0.54
DDX55-202ENST00000354291 MRPL42Q9Y6G3 142 aaKnown RBP18.44■□□□□ 0.54
DDX55-202ENST00000354291 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 ATG2AQ2TAZ0 1938 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 PER2O15055 1255 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 DGKIO75912 1065 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 TGFB3P10600 412 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 MFSD6Q6ZSS7 791 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 PI4K2BQ8TCG2 481 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 USP26Q9BXU7 913 aa18.43■□□□□ 0.54
DDX55-202ENST00000354291 SP100P23497 879 aaPredicted RBP18.42■□□□□ 0.54
DDX55-202ENST00000354291 HOXA13P31271 388 aaPredicted RBP18.42■□□□□ 0.54
DDX55-202ENST00000354291 NUBP1P53384 320 aa18.42■□□□□ 0.54
DDX55-202ENST00000354291 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
DDX55-202ENST00000354291 LPIN1Q14693 890 aa18.42■□□□□ 0.54
DDX55-202ENST00000354291 PAN2Q504Q3 1202 aaKnown RBP18.42■□□□□ 0.54
DDX55-202ENST00000354291 NAALADL2Q58DX5 795 aa18.42■□□□□ 0.54
DDX55-202ENST00000354291 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
DDX55-202ENST00000354291 IL31RAQ8NI17 732 aa18.42■□□□□ 0.54
DDX55-202ENST00000354291 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
DDX55-202ENST00000354291 ATF7P17544 494 aaPredicted RBP18.41■□□□□ 0.54
DDX55-202ENST00000354291 MX1P20591 662 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 HSD17B4P51659 736 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 PGM5Q15124 567 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 STOX1Q6ZVD7 989 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 TRIM50Q86XT4 487 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 OTUD7AQ8TE49 926 aaPredicted RBP18.41■□□□□ 0.54
DDX55-202ENST00000354291 EHMT1Q9H9B1 1298 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 JMJD4Q9H9V9 463 aa18.41■□□□□ 0.54
DDX55-202ENST00000354291 CCND2P30279 289 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 NBL1P41271 181 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 AAMPQ13685 434 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 RUFY4Q6ZNE9 571 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 CYFIP1Q7L576 1253 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 SUSD6Q92537 303 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 KAT14Q9H8E8 782 aa18.4■□□□□ 0.54
DDX55-202ENST00000354291 PLXNA3P51805 1871 aa18.39■□□□□ 0.54
DDX55-202ENST00000354291 GVINP1Q7Z2Y8 2422 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 OPLAHO14841 1288 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 IBSPP21815 317 aaPredicted RBP18.39■□□□□ 0.53
DDX55-202ENST00000354291 ADAM17P78536 824 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 ANKRD45Q5TZF3 282 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 FRMD5Q7Z6J6 570 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 DGKHQ86XP1 1220 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 CMTR2Q8IYT2 770 aaKnown RBP18.39■□□□□ 0.53
DDX55-202ENST00000354291 ADSSL1Q8N142 457 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 NKD2Q969F2 451 aaPredicted RBP18.39■□□□□ 0.53
DDX55-202ENST00000354291 NEK1Q96PY6 1258 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 APOL5Q9BWW9 433 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 AMNQ9BXJ7 453 aa18.39■□□□□ 0.53
DDX55-202ENST00000354291 ZNF215Q9UL58 517 aaPredicted RBP18.39■□□□□ 0.53
DDX55-202ENST00000354291 SP4Q02446 784 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
DDX55-202ENST00000354291 ASPRV1Q53RT3 343 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 RSPH3Q86UC2 560 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 TMEM105Q8N8V8 129 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 KREMEN2Q8NCW0 462 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 ESR2Q92731 530 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 YTHDC1Q96MU7 727 aaKnown RBP18.38■□□□□ 0.53
DDX55-202ENST00000354291 GPR20Q99678 358 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
DDX55-202ENST00000354291 TTC3P53804 2025 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 TRIM6-TRIM34B2RNG4 842 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 PARP1P09874 1014 aaKnown RBP18.37■□□□□ 0.53
DDX55-202ENST00000354291 MGAT3Q09327 533 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 NEDD9Q14511 834 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 FBXO47Q5MNV8 452 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 SPOUT1Q5T280 376 aaKnown RBP18.37■□□□□ 0.53
DDX55-202ENST00000354291 METTL7BQ6UX53 244 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 RTN4RL1Q86UN2 441 aaPredicted RBP18.37■□□□□ 0.53
DDX55-202ENST00000354291 TBC1D10CQ8IV04 446 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 VN1R2Q8NFZ6 395 aa18.37■□□□□ 0.53
DDX55-202ENST00000354291 ATP8B4Q8TF62 1192 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 309.1 ms