RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ZNF268Q14587 947 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 ACCSLQ4AC99 568 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 HIBCHQ6NVY1 386 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 LMBR1Q8WVP7 490 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 L3MBTL3Q96JM7 780 aaPredicted RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 FAM129AQ9BZQ8 928 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 NDST4Q9H3R1 872 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 CNOT8Q9UFF9 292 aaKnown RBP16.38■□□□□ 0.21
TRAF3-202ENST00000351691 BAIAP2L1Q9UHR4 511 aa16.38■□□□□ 0.21
TRAF3-202ENST00000351691 FGFR1OPO95684 399 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 RPSAP08865 295 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 TMOD1P28289 359 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 EIF3BP55884 814 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 ERVK-9P63128 1117 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 CCDC178Q5BJE1 867 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 ODF2Q5BJF6 829 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 BZW1Q7L1Q6 419 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 SCFD2Q8WU76 684 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 CELF1Q92879 486 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 TLCD1Q96CP7 247 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 PBKQ96KB5 322 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 NLRP3Q96P20 1036 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 DCP1AQ9NPI6 582 aaPredicted RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 NOP53Q9NZM5 478 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 LRRC53A6NM62 1247 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 KIF5BP33176 963 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 MECOMQ03112 1051 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 PPP1R7Q15435 360 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 MAN2A1Q16706 1144 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 PIK3AP1Q6ZUJ8 805 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 TAF1LQ8IZX4 1826 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 SAAL1Q96ER3 474 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 STAMBPL1Q96FJ0 436 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 ANKRD27Q96NW4 1050 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 XPO6Q96QU8 1125 aaKnown RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 NARFQ9UHQ1 456 aa16.37■□□□□ 0.21
TRAF3-202ENST00000351691 CORO1CQ9ULV4 474 aaPredicted RBP16.37■□□□□ 0.21
TRAF3-202ENST00000351691 CYP2D7A0A087X1C5 515 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 PALMO75781 387 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 SCG2P13521 617 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 IBSPP21815 317 aaPredicted RBP16.36■□□□□ 0.21
TRAF3-202ENST00000351691 CALML3P27482 149 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 SLC1A4P43007 532 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 MKRN4PQ13434 485 aaPredicted RBP16.36■□□□□ 0.21
TRAF3-202ENST00000351691 DTHD1Q6ZMT9 781 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 PIGWQ7Z7B1 504 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 PSMD1Q99460 953 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 SH3GLB2Q9NR46 395 aa16.36■□□□□ 0.21
TRAF3-202ENST00000351691 MYH1P12882 1939 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 FRMD3A2A2Y4 597 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 SMNDC1O75940 238 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 ECM2O94769 699 aaPredicted RBP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 ANP32DO95626 131 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 INHBEP58166 350 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 MYO1EQ12965 1108 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 BIRC2Q13490 618 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 HLTFQ14527 1009 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 PFKFB3Q16875 520 aaPredicted RBP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 HGSNATQ68CP4 663 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 CENPPQ6IPU0 288 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 RRAGAQ7L523 313 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 RNF217Q8TC41 542 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 ACTRT1Q8TDG2 376 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 ANKS1AQ92625 1134 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 SPDL1Q96EA4 605 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 KCNMB3Q9NPA1 279 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 NOVA2Q9UNW9 492 aaKnown RBP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 LAD1O00515 517 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 BUB1O43683 1085 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 NLRP5P59047 1200 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 AP1ARQ63HQ0 302 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 FOXR2Q6PJQ5 311 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 CNKSR1Q969H4 720 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 ZNF317Q96PQ6 595 aaPredicted RBP16.35■□□□□ 0.21
TRAF3-202ENST00000351691 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 TAF1P21675 1872 aa16.35■□□□□ 0.21
TRAF3-202ENST00000351691 LY75O60449 1722 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 CCDC188H7C350 402 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 EPHB6O15197 1021 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 SERPING1P05155 500 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 PRPHP41219 470 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 MAGOHP61326 146 aaKnown RBP16.34■□□□□ 0.21
TRAF3-202ENST00000351691 GFPT1Q06210 699 aaPredicted RBP16.34■□□□□ 0.21
TRAF3-202ENST00000351691 TRADDQ15628 312 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 SLC9C1Q4G0N8 1177 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 TBC1D9BQ66K14 1250 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
TRAF3-202ENST00000351691 CNNM4Q6P4Q7 775 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 STAG2Q8N3U4 1231 aa16.34■□□□□ 0.21
TRAF3-202ENST00000351691 SEC14L1Q92503 715 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms