RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 ELF1P32519 619 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PDE1AP54750 535 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 TRPC3Q13507 836 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 NOMO1Q15155 1222 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 ERFEQ4G0M1 354 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 NEDD1Q8NHV4 660 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 ACSF2Q96CM8 615 aaPredicted RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 KIF2CQ99661 725 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 NLRC4Q9NPP4 1024 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PLCB1Q9NQ66 1216 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 IMPACTQ9P2X3 320 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PYCARDQ9ULZ3 195 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 GPSM3Q9Y4H4 160 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 ZFYVE9O95405 1425 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PBRM1Q86U86 1689 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 B2RBV5 119 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 H0YHG0 523 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PSMD9O00233 223 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 STAM2O75886 525 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 TUBBP07437 444 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 CASTP20810 708 aaKnown RBP6.54□□□□□ -1.36
RFC1-201ENST00000349703 AOX1Q06278 1338 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 IFI44LQ53G44 452 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 PPIP5K1Q6PFW1 1433 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 SEPT14Q6ZU15 432 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 CCDC83Q8IWF9 413 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 COG1Q8WTW3 980 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 MRC2Q9UBG0 1479 aa6.54□□□□□ -1.36
RFC1-201ENST00000349703 RAD50Q92878 1312 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 TMEM88BA6NKF7 163 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 DAPK3O43293 454 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 CBX6O95503 412 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 EGFRP00533 1210 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 MMEP08473 750 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 UBTFL1P0CB47 393 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 ARAFP10398 606 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 IKQ13123 557 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 PPP2R5CQ13362 524 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 SEPT2Q15019 361 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 GOLGA5Q8TBA6 731 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 PHKBQ93100 1093 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 COG3Q96JB2 828 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 JAKMIP1Q96N16 626 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 PPP1R14DQ9NXH3 145 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 RSPH14Q9UHP6 348 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 PCDHGC3Q9UN70 934 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 BCS1LQ9Y276 419 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 ABCC4O15439 1325 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 CCDC69A6NI79 296 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 B3GALNT1O75752 331 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 GCH1P30793 250 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 PKP1Q13835 747 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 COL9A2Q14055 689 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 UBE2Q1Q7Z7E8 422 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 ZNF653Q96CK0 615 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 TUBGCP5Q96RT8 1024 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 ZSWIM6Q9HCJ5 1215 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 ABCF3Q9NUQ8 709 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 TRMT1Q9NXH9 659 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 RRN3P2A6NIE6 340 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 H3BRJ5 948 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 KRIT1O00522 736 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 SKAP2O75563 359 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 P4HA1P13674 534 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 GSPT1P15170 499 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 ITGADQ13349 1161 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 ELOAQ14241 798 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 MAP9Q49MG5 647 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 CES5AQ6NT32 575 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 NECAB2Q7Z6G3 386 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 TRMT2BQ96GJ1 504 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 MIPEPQ99797 713 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 IFT80Q9P2H3 777 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 TRHDEQ9UKU6 1024 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 KCNH4Q9UQ05 1017 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 RTN3O95197 1032 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 ADKP55263 362 aaKnown RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 BTG3Q14201 252 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 CRELD2Q6UXH1 353 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 C11orf96Q7Z7L8 435 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 CROCCP3Q8IVE0 287 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 C10orf67Q8IYJ2 551 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 CCDC170Q8IYT3 715 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 NXPE1Q8N323 547 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 CPA6Q8N4T0 437 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 RUFY1Q96T51 708 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 HERPUD2Q9BSE4 406 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 ZSCAN16Q9H4T2 348 aaPredicted RBP6.53□□□□□ -1.36
RFC1-201ENST00000349703 ANKRD6Q9Y2G4 727 aa6.53□□□□□ -1.36
RFC1-201ENST00000349703 HNRNPCL2B2RXH8 293 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 GARTP22102 1010 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 RAB33AQ14088 237 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 RUNDC3AQ59EK9 446 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 KRT26Q7Z3Y9 468 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 TPH2Q8IWU9 490 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 POF1BQ8WVV4 589 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 GTF3C6Q969F1 213 aa6.52□□□□□ -1.37
RFC1-201ENST00000349703 RELTQ969Z4 430 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms