RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 TAF4BQ92750 862 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 TSG101Q99816 390 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 TRPC5Q9UL62 973 aaPredicted RBP19.52■□□□□ 0.72
VHL-202ENST00000345392 COL4A3BPQ9Y5P4 624 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 NFS1Q9Y697 457 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 LAMB2P55268 1798 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 CASZ1Q86V15 1759 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 ABCB11O95342 1321 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 DNM1LO00429 736 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 CEP104O60308 925 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 ZNF844Q08AG5 666 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 KLHL30Q0D2K2 578 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 USP17L2Q6R6M4 530 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 FGFBP2Q9BYJ0 223 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 C6orf50Q9HD87 102 aa19.52■□□□□ 0.72
VHL-202ENST00000345392 GOLGA6L7A0A1B0GV03 622 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 SLC37A4O43826 429 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 CALCRLQ16602 461 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 NELFCDQ8IXH7 590 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 UBLCP1Q8WVY7 318 aaPredicted RBP19.51■□□□□ 0.71
VHL-202ENST00000345392 ANKS1AQ92625 1134 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 NLRP3Q96P20 1036 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 EDEM3Q9BZQ6 932 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 LUC7LQ9NQ29 371 aaKnown RBP19.51■□□□□ 0.71
VHL-202ENST00000345392 CNOT8Q9UFF9 292 aaKnown RBP19.51■□□□□ 0.71
VHL-202ENST00000345392 DCDC2CA8MYV0 355 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 MYBP10242 640 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 RPS6KA1Q15418 735 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 ZNF444Q8N0Y2 327 aaPredicted RBP19.51■□□□□ 0.71
VHL-202ENST00000345392 C1orf131Q8NDD1 294 aaKnown RBP19.51■□□□□ 0.71
VHL-202ENST00000345392 GJA10Q969M2 543 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 SLC12A6Q9UHW9 1150 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 TMEM59LQ9UK28 342 aa19.51■□□□□ 0.71
VHL-202ENST00000345392 TDP2O95551 362 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 PDHBP11177 359 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 CDR1P51861 262 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 FKBP3Q00688 224 aaKnown RBP19.5■□□□□ 0.71
VHL-202ENST00000345392 CLEC4GQ6UXB4 293 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 ARFGAP2Q8N6H7 521 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 SNX29Q8TEQ0 813 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 UIMC1Q96RL1 719 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 DDX47Q9H0S4 455 aaKnown RBP19.5■□□□□ 0.71
VHL-202ENST00000345392 LRRC4CQ9HCJ2 640 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
VHL-202ENST00000345392 GNA11P29992 359 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 SOGA3Q5TF21 947 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 MYOCDQ8IZQ8 938 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 RAD54LQ92698 747 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 FBXL5Q9UKA1 691 aa19.5■□□□□ 0.71
VHL-202ENST00000345392 NOVA2Q9UNW9 492 aaKnown RBP19.5■□□□□ 0.71
VHL-202ENST00000345392 SART1O43290 800 aaKnown RBP19.49■□□□□ 0.71
VHL-202ENST00000345392 TRAPPC3O43617 180 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 ECM1Q16610 540 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 CEP57Q86XR8 500 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 MTMR9Q96QG7 549 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 PIGSQ96S52 555 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 UBA5Q9GZZ9 404 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 HAUS2Q9NVX0 235 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 ANKIB1Q9P2G1 1089 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 STK17AQ9UEE5 414 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 RREB1Q92766 1687 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 KIAA1551Q9HCM1 1747 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 GIMAP7Q8NHV1 300 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 SETDB2Q96T68 719 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 RIC8AQ9NPQ8 531 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 LEMD3Q9Y2U8 911 aa19.49■□□□□ 0.71
VHL-202ENST00000345392 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
VHL-202ENST00000345392 CLSTN1O94985 981 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
VHL-202ENST00000345392 SF3A3Q12874 501 aaKnown RBP eCLIP19.48■□□□□ 0.713e-11■■■■■ 32.8
VHL-202ENST00000345392 LRIG3Q6UXM1 1119 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 SEPT12Q8IYM1 358 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 REXO1Q8N1G1 1221 aaKnown RBP19.48■□□□□ 0.71
VHL-202ENST00000345392 SYN2Q92777 582 aaPredicted RBP19.48■□□□□ 0.71
VHL-202ENST00000345392 SEC16BQ96JE7 1060 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 NUCKS1Q9H1E3 243 aaKnown RBP19.48■□□□□ 0.71
VHL-202ENST00000345392 GGA2Q9UJY4 613 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.48■□□□□ 0.71
VHL-202ENST00000345392 LAMB1P07942 1786 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 PHF20L1A8MW92 1017 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 KIF4AO95239 1232 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 ACTN1P12814 892 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 COASYQ13057 564 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 CHADLQ6NUI6 762 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 RGS17Q9UGC6 210 aaPredicted RBP19.48■□□□□ 0.71
VHL-202ENST00000345392 AMACRQ9UHK6 382 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 DAPK3O43293 454 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 LDHBP07195 334 aaKnown RBP19.48■□□□□ 0.71
VHL-202ENST00000345392 ITGA4P13612 1032 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 PTK2Q05397 1052 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 NFIXQ14938 502 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 PLCB4Q15147 1175 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 ASIC2Q16515 512 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 ZCWPW2Q504Y3 356 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 CYB5D1Q6P9G0 228 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 FUKQ8N0W3 1084 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 SCFD2Q8WU76 684 aa19.48■□□□□ 0.71
VHL-202ENST00000345392 RAPGEF5Q92565 580 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms