RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 VPS37BQ9H9H4 285 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TXNDC16Q9P2K2 825 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 ESYT3A0FGR9 886 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 PALMO75781 387 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 IFNAR2P48551 515 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 IRX5P78411 483 aaPredicted RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 GFPT1Q06210 699 aaPredicted RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 ALS2CLQ60I27 953 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 NFRKBQ6P4R8 1299 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 RNF10Q8N5U6 811 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 KRT19P08727 400 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 PTK2Q05397 1052 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 C10orf76Q5T2E6 689 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 SPATS2Q86XZ4 545 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 GSPT2Q8IYD1 628 aaKnown RBP7.83□□□□□ -1.16
VCAN-202ENST00000342785 WHAMMQ8TF30 809 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TSNARE1Q96NA8 513 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 MMS19Q96T76 1030 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 TRIM7Q9C029 511 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 AGPAT5Q9NUQ2 364 aa7.83□□□□□ -1.16
VCAN-202ENST00000342785 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.83□□□□□ -1.16
VCAN-202ENST00000342785 PXDNQ92626 1479 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 MMP10P09238 476 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 STAT2P52630 851 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 IFT88Q13099 833 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ELOA2Q8IYF1 753 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 VTI1AQ96AJ9 217 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ZNF653Q96CK0 615 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 EDEM3Q9BZQ6 932 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 MROH1Q8NDA8 1641 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 CNTNAP5Q8WYK1 1306 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 PASKQ96RG2 1323 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 NCK2O43639 380 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 TBC1D8O95759 1140 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 MFAP3P55082 362 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 MAP3K14Q99558 947 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 SPATA31D1Q6ZQQ2 1576 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 FGFR2P21802 821 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 QTRT2Q9H974 415 aaKnown RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 KDM6AO15550 1401 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 POTEFA5A3E0 1075 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 F5H6K3 240 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 NR3C1P04150 777 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 POTEIP0CG38 1075 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 SRGNP10124 158 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 KLRC3Q07444 240 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 DMP1Q13316 513 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 POTEGQ6S5H5 508 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 POTEEQ6S8J3 1075 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ILDR1Q86SU0 546 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 CLEC10AQ8IUN9 316 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 SEPT12Q8IYM1 358 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 FBXL16Q8N461 479 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 RUNDC3BQ96NL0 473 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 OSBPL9Q96SU4 736 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 SUGCTQ9HAC7 445 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 UBE2TQ9NPD8 197 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 LRRIQ4A6NIV6 560 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 VGLL3A8MV65 326 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 PPP1R3GB7ZBB8 358 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 CCDC188H7C350 402 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 PDIA5Q14554 519 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 GIMAP8Q8ND71 665 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 COG1Q8WTW3 980 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 FAM20AQ96MK3 541 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ACCSQ96QU6 501 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ANAPC4Q9UJX5 808 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 CLTCQ00610 1675 aaKnown RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 MYO1CO00159 1063 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 SORBS3O60504 671 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 RAD17O75943 681 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 FGGP02679 453 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ZSCAN20P17040 1043 aaPredicted RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 NR1D1P20393 614 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 RASA1P20936 1047 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 PDCLQ13371 301 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 GLE1Q53GS7 698 aaKnown RBP7.82□□□□□ -1.16
VCAN-202ENST00000342785 SPATA4Q8NEY3 305 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 HOOK2Q96ED9 719 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 TMEM206Q9H813 350 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.82□□□□□ -1.16
VCAN-202ENST00000342785 DNAJC12Q9UKB3 198 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 ZNF148Q9UQR1 794 aa7.82□□□□□ -1.16
VCAN-202ENST00000342785 TMEM131LA2VDJ0 1609 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 ITIH6Q6UXX5 1313 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 A0A087WUV0 522 aaPredicted RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 H0YCG3 227 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 NPR1P16066 1061 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 ATF7P17544 494 aaPredicted RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 BPIFB4P59827 614 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 ATP6V0A1Q93050 837 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 RIOK1Q9BRS2 568 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 INTS9Q9NV88 658 aaKnown RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 MTMR4Q9NYA4 1195 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 DEPDC5O75140 1603 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 MEGF6O75095 1541 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 THAP12O43422 761 aa7.81□□□□□ -1.16
VCAN-202ENST00000342785 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
VCAN-202ENST00000342785 ECM2O94769 699 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms