RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 PCDHB15Q9Y5E8 787 aa19.06■□□□□ 0.64
NECTIN1-202ENST00000340882 DMDP11532 3685 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 ENPP3O14638 875 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 DHX16O60231 1041 aaKnown RBP19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 GLP2RO95838 553 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 NMIQ13287 307 aaPredicted RBP19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 CBX2Q14781 532 aaPredicted RBP19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 RUFY4Q6ZNE9 571 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 STAG2Q8N3U4 1231 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 SMRP1Q8NCR6 262 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 EVI5LQ96CN4 794 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 EHMT1Q9H9B1 1298 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 PCDHGC5Q9Y5F6 944 aa19.05■□□□□ 0.64
NECTIN1-202ENST00000340882 CCDC171Q6TFL3 1326 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 ITGB1P05556 798 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 TGFB3P10600 412 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 PTPRZ1P23471 2315 aaPredicted RBP19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 BTG3Q14201 252 aaPredicted RBP19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 LPIN1Q14693 890 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 ASPRV1Q53RT3 343 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 SPPL3Q8TCT6 385 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 LMBR1Q8WVP7 490 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 ESR2Q92731 530 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 ASIC4Q96FT7 647 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 PRRX2Q99811 253 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 BARX2Q9UMQ3 279 aaPredicted RBP19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 RWDD3Q9Y3V2 267 aa19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 MRPL42Q9Y6G3 142 aaKnown RBP19.04■□□□□ 0.64
NECTIN1-202ENST00000340882 KDM4AO75164 1064 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 DGKIO75912 1065 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 ARHGAP4P98171 946 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 RBM10P98175 930 aaKnown RBP19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 MGAT3Q09327 533 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 COASYQ13057 564 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 SEMA3FQ13275 785 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 RBM23Q86U06 439 aaKnown RBP19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 EFHBQ8N7U6 833 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 ENAHQ8N8S7 591 aaPredicted RBP19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 LINC01599Q8WXQ3 324 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 GPR20Q99678 358 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 AMNQ9BXJ7 453 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 USP15Q9Y4E8 981 aaPredicted RBP19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 DCHS1Q96JQ0 3298 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 VPS13AQ96RL7 3174 aa19.03■□□□□ 0.64
NECTIN1-202ENST00000340882 PARP1P09874 1014 aaKnown RBP19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 PCP11498 1178 aaKnown RBP19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 NRIP1P48552 1158 aa19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 MRPS9P82933 396 aaKnown RBP19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 PKN1Q16512 942 aa19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 SLC35G1Q2M3R5 365 aa19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 CYFIP1Q7L576 1253 aa19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 PLVAPQ9BX97 442 aa19.02■□□□□ 0.64
NECTIN1-202ENST00000340882 MYO10Q9HD67 2058 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 B4E1Z4 1266 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 PDGFBP01127 241 aaPredicted RBP19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 CCND2P30279 289 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 AVPR2P30518 371 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 SIGLEC14Q08ET2 396 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 UTP14CQ5TAP6 766 aaKnown RBP19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 RTN4RL1Q86UN2 441 aaPredicted RBP19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 FCHSD1Q86WN1 690 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 CRIPAKQ8N1N5 446 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 KLHL23Q8NBE8 558 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 ATOH1Q92858 354 aaPredicted RBP19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 P2RX5Q93086 422 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 MTMR8Q96EF0 704 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 RPGRIP1Q96KN7 1286 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 ZSCAN10Q96SZ4 725 aaPredicted RBP19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 USP26Q9BXU7 913 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 RNF41Q9H4P4 317 aaPredicted RBP19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 PCDHA1Q9Y5I3 950 aa19.01■□□□□ 0.63
NECTIN1-202ENST00000340882 H0Y858 1186 aa19■□□□□ 0.63
NECTIN1-202ENST00000340882 NOP56O00567 594 aaKnown RBP19■□□□□ 0.63
NECTIN1-202ENST00000340882 GNAT1P11488 350 aa19■□□□□ 0.63
NECTIN1-202ENST00000340882 POF1BQ8WVV4 589 aa19■□□□□ 0.63
NECTIN1-202ENST00000340882 AGO3Q9H9G7 860 aaKnown RBP19■□□□□ 0.63
NECTIN1-202ENST00000340882 TLR9Q9NR96 1032 aa19■□□□□ 0.63
NECTIN1-202ENST00000340882 ZSWIM5Q9P217 1185 aa19■□□□□ 0.63
NECTIN1-202ENST00000340882 RIF1Q5UIP0 2472 aaKnown RBP18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 FNDC1Q4ZHG4 1894 aaPredicted RBP18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 TRIM6-TRIM34B2RNG4 842 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 GATMP50440 423 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 SP4Q02446 784 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 PAN2Q504Q3 1202 aaKnown RBP18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 FBXO47Q5MNV8 452 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 METTL7BQ6UX53 244 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 ASCL5Q7RTU5 278 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 IQCA1Q86XH1 822 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 VN1R2Q8NFZ6 395 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 PHF7Q9BWX1 381 aaPredicted RBP18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 MAP3K20Q9NYL2 800 aaKnown RBP18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 RTEL1Q9NZ71 1219 aa18.99■□□□□ 0.63
NECTIN1-202ENST00000340882 SPATA31C2B4DYI2 1134 aa18.98■□□□□ 0.63
NECTIN1-202ENST00000340882 ZBTB5O15062 677 aa18.98■□□□□ 0.63
NECTIN1-202ENST00000340882 ICAM3P32942 547 aa18.98■□□□□ 0.63
NECTIN1-202ENST00000340882 PDE1AP54750 535 aa18.98■□□□□ 0.63
NECTIN1-202ENST00000340882 ZBTB10Q96DT7 871 aa18.98■□□□□ 0.63
NECTIN1-202ENST00000340882 INPP4AQ96PE3 977 aaPredicted RBP18.98■□□□□ 0.63
NECTIN1-202ENST00000340882 FAM186AA6NE01 2351 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms