RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 OR6J1Q8NGC5 347 aa20.11■□□□□ 0.81
SDCBP2-201ENST00000339987 SH3TC2Q8TF17 1288 aa20.11■□□□□ 0.81
SDCBP2-201ENST00000339987 GOLGA6L4A6NEF3 574 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 CHMP2AO43633 222 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 PRPF40AO75400 957 aaKnown RBP20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 ATG7O95352 703 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 CMA1P23946 247 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 CNGA1P29973 690 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 MCM4P33991 863 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 RESP18Q5W5W9 173 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 TLK2Q86UE8 772 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 PPTC7Q8NI37 304 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 ERMNQ8TAM6 284 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 NEK9Q8TD19 979 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 SPATA33Q96N06 139 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 CCSER1Q9C0I3 900 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 HMX1Q9NP08 348 aaPredicted RBP20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 DISC1Q9NRI5 854 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 PCDHA10Q9Y5I2 948 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 SORBS3O60504 671 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 MSCO60682 206 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 RARBP10826 455 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 UBE2HP62256 183 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 NKX3-2P78367 333 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 HAUS3Q68CZ6 603 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 ABHD15Q6UXT9 468 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 SEPT1Q8WYJ6 367 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 SYMPKQ92797 1274 aaKnown RBP20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 GPR20Q99678 358 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 UPF3AQ9H1J1 476 aaKnown RBP20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 LMBRD1Q9NUN5 540 aa20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 DDX20Q9UHI6 824 aaKnown RBP20.1■□□□□ 0.81
SDCBP2-201ENST00000339987 GSTTP1A0A1W2PQM5 241 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 POTEFA5A3E0 1075 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 PP2D1A8MPX8 630 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 NOP56O00567 594 aaKnown RBP20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 DYNC1LI2O43237 492 aaPredicted RBP20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 PSAPP07602 524 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 SUPT20HL2P0C7V6 817 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 HOXD8P13378 290 aaPredicted RBP20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 PTGS1P23219 599 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 UBA7P41226 1012 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 SP4Q02446 784 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 HSDL1Q3SXM5 330 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 SPECC1Q5M775 1068 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 KRT79Q5XKE5 535 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 MIS18BP1Q6P0N0 1132 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 LENG1Q96BZ8 264 aaPredicted RBP20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 HSD17B14Q9BPX1 270 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 MMTAG2Q9BU76 263 aaKnown RBP20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 POLR3CQ9BUI4 534 aaPredicted RBP20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 AP5M1Q9H0R1 490 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 TELO2Q9Y4R8 837 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 SAMM50Q9Y512 469 aa20.09■□□□□ 0.81
SDCBP2-201ENST00000339987 IGKV6D-21A0A0A0MT36 114 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 FAM237AA0A1B0GTK4 181 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 A6NJR5 290 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 GADD45BO75293 160 aaPredicted RBP20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 TXLNAP40222 546 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 GJA9P57773 515 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 USP49Q70CQ1 688 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 CABP7Q86V35 215 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 SNX29Q8TEQ0 813 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 AFG1LQ8WV93 481 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 MRPS27Q92552 414 aaKnown RBP20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 ARMC5Q96C12 935 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 EPSTI1Q96J88 318 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 EIF2AK1Q9BQI3 630 aaKnown RBP20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 TUFT1Q9NNX1 390 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 FAM13BQ9NYF5 915 aa20.08■□□□□ 0.8
SDCBP2-201ENST00000339987 SYNRGQ9UMZ2 1314 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 DDX11L8A8MPP1 907 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 P4HBP07237 508 aaKnown RBP20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 MUTP22033 750 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 RPA1P27694 616 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 CDC25AP30304 524 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 HYIQ5T013 277 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 FSIP1Q8NA03 581 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 SPC25Q9HBM1 224 aa20.07■□□□□ 0.8
SDCBP2-201ENST00000339987 KDM3AQ9Y4C1 1321 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 PPFIA4O75335 1185 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 LGR5O75473 907 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 MMP3P08254 477 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 SPATA31C1P0DKV0 1188 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 TCF7P36402 384 aaPredicted RBP20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 CCT6AP40227 531 aaKnown RBP20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 CPT1AP50416 773 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 BRDTQ58F21 947 aaPredicted RBP20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 KCTD17Q8N5Z5 321 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 DYDC2Q96IM9 177 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 UNC93B1Q9H1C4 597 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 PAK6Q9NQU5 681 aaPredicted RBP20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 HPSEQ9Y251 543 aa20.06■□□□□ 0.8
SDCBP2-201ENST00000339987 EMSYQ7Z589 1322 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 CTAGE5O15320 804 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 MED24O75448 989 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 SLITRK3O94933 977 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 PFKFB1P16118 471 aa20.05■□□□□ 0.8
SDCBP2-201ENST00000339987 PTMSP20962 102 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms