RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 PLTPP55058 493 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 ODR4Q5SWX8 454 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 CCDC105Q8IYK2 499 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 MSANTD4Q8NCY6 345 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 SHISA4Q96DD7 197 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 DNAJC17Q9NVM6 304 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 ATP6V0A2Q9Y487 856 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 FLT1P17948 1338 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 AFPP02771 609 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 CCDC172P0C7W6 258 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 MYBL2P10244 700 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 SLC9A1P19634 815 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 NALCNQ8IZF0 1738 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 GUF1Q8N442 669 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 KIAA0895Q8NCT3 520 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 PACSIN1Q9BY11 444 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 RGL1Q9NZL6 768 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 PLAAQ9Y263 795 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 TOPAZ1Q8N9V7 1692 aa12.12□□□□□ -0.47
SEMA4D-201ENST00000339861 GNA14O95837 355 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 MESDQ14696 234 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 PDXDC1Q6P996 788 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 REXO2Q9Y3B8 237 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 NR1D1P20393 614 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 GRB10Q13322 594 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 SEPT2Q15019 361 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 WDR59Q6PJI9 974 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 PNMA8AQ86V59 439 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 DNAJC7Q99615 494 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 TOM1O60784 492 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 PDHBP11177 359 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 QRICH1Q2TAL8 776 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 IRF2BP1Q8IU81 584 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 ARL8AQ96BM9 186 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 C7orf25Q9BPX7 421 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 RASAL2Q9UJF2 1139 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 GJB7Q6PEY0 223 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 FAM186BQ8IYM0 893 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 ANKRD42Q8N9B4 389 aa12.11□□□□□ -0.47
SEMA4D-201ENST00000339861 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 ZNF746Q6NUN9 644 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 LRRC31Q6UY01 552 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 CAPN12Q6ZSI9 719 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 GSTA5Q7RTV2 222 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 HNRNPLLQ8WVV9 542 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 ASIC3Q9UHC3 531 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 AMACRQ9UHK6 382 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 USTQ9Y2C2 406 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 FGGP02679 453 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 TRIM49P0CI25 452 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 TRIM49CP0CI26 452 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 SEC24CP53992 1094 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 GPATCH4Q5T3I0 446 aaKnown RBP12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 KCNK18Q7Z418 384 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 SPATA20Q8TB22 786 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 DNAJC5Q9H3Z4 198 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 BCL9O00512 1426 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 COPB2P35606 906 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 SPZ1Q9BXG8 430 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 MTMR4Q9NYA4 1195 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 CEP72Q9P209 647 aa12.1□□□□□ -0.47
SEMA4D-201ENST00000339861 A0A087X0T9 212 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 PGRMC1O00264 195 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 ZBTB5O15062 677 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 KIF4AO95239 1232 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 FAM228BP0C875 321 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 LRCH2Q5VUJ6 765 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 TAB3Q8N5C8 712 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 IQCDQ96DY2 449 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 MTMR8Q96EF0 704 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 PLAGL2Q9UPG8 496 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 A0A1W2PRG0 241 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 PALM3A6NDB9 673 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 K7ENM7 598 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 PRPHP41219 470 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 EMBQ6PCB8 327 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 NSMFQ6X4W1 530 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 GLYCTKQ8IVS8 523 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 MTRF1LQ9UGC7 380 aaKnown RBP12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 GOLGA8IPA6NC78 632 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 GOLGA8JA6NMD2 632 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 CTNNA2P26232 953 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 SNX1Q13596 522 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 FBXW10Q5XX13 1052 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms