RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 MEIS1O00470 390 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 MESDQ14696 234 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 OTUD6AQ7L8S5 288 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 CREG2Q8IUH2 290 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 TCRBV5S4A2TA0A5A2 114 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 LRRN2O75325 713 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 ELF1P32519 619 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 EIF3BP55884 814 aaKnown RBP13.57□□□□□ -0.24
RIOK3-201ENST00000339486 WDR59Q6PJI9 974 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 CCDC13Q8IYE1 715 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 SPATA20Q8TB22 786 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 GCNT4Q9P109 453 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 SUFUQ9UMX1 484 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 NOC2LQ9Y3T9 749 aaKnown RBP13.57□□□□□ -0.24
RIOK3-201ENST00000339486 PLA2G4BP0C869 781 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 CDC37Q16543 378 aaPredicted RBP13.57□□□□□ -0.24
RIOK3-201ENST00000339486 CASKIN2Q8WXE0 1202 aa13.57□□□□□ -0.24
RIOK3-201ENST00000339486 A0A1W2PQJ5 194 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 MYMKA6NI61 221 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 SMIM22K7EJ46 135 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 FERP16591 822 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 GBP1P32455 592 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 SLC18A3Q16572 532 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 USH1GQ495M9 461 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 ERFEQ4G0M1 354 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 C10orf76Q5T2E6 689 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 KDM7AQ6ZMT4 941 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 CHMP6Q96FZ7 201 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 C7orf25Q9BPX7 421 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.56□□□□□ -0.242e-12■■□□□ 13.2
RIOK3-201ENST00000339486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.56□□□□□ -0.24
RIOK3-201ENST00000339486 WNT7AO00755 349 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 RASGRF2O14827 1237 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 UFL1O94874 794 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 TDP2O95551 362 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 RFC4P35249 363 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 COASYQ13057 564 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 ZNF211Q13398 564 aaPredicted RBP13.56□□□□□ -0.24
RIOK3-201ENST00000339486 SUGP1Q8IWZ8 645 aaKnown RBP13.56□□□□□ -0.24
RIOK3-201ENST00000339486 MTMR8Q96EF0 704 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 SEC16BQ96JE7 1060 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 PKD2L1Q9P0L9 805 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 ZNF804BA4D1E1 1349 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 ORC4O43929 436 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 PRPF6O94906 941 aaKnown RBP13.56□□□□□ -0.24
RIOK3-201ENST00000339486 FAM153BP0C7A2 387 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 FAM153CQ494X1 144 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 PPP4R3AQ6IN85 833 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 TPH2Q8IWU9 490 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 PROM2Q8N271 834 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 ARHGEF2Q92974 986 aaKnown RBP13.56□□□□□ -0.24
RIOK3-201ENST00000339486 THOC1Q96FV9 657 aaKnown RBP13.56□□□□□ -0.24
RIOK3-201ENST00000339486 EDEM3Q9BZQ6 932 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 UBXN6Q9BZV1 441 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 FAM153AQ9UHL3 310 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 ZBTB21Q9ULJ3 1066 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 C3P01024 1663 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 TMEM94Q12767 1356 aa13.56□□□□□ -0.24
RIOK3-201ENST00000339486 E9PMD0 336 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 RIMBP2O15034 1052 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 BCRP11274 1271 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 KRT15P19012 456 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 BTDP43251 543 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 ZNF131P52739 623 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 NUGGCQ68CJ6 796 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 RAD54LQ92698 747 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-201ENST00000339486 MLXIPLQ9NP71 852 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 CEP83Q9Y592 693 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 AGLP35573 1532 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 TTI1O43156 1089 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 CYP19A1P11511 503 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-201ENST00000339486 PRLRP16471 622 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 SLC16A2P36021 539 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 SEMA3FQ13275 785 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 KBTBD4Q9NVX7 518 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 GGT7Q9UJ14 662 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 IKBKGQ9Y6K9 419 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 LMNB1P20700 586 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 GRM4Q14833 912 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 DPP8Q6V1X1 898 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-201ENST00000339486 DNAJC17Q9NVM6 304 aaKnown RBP13.55□□□□□ -0.24
RIOK3-201ENST00000339486 LOC102724428A0A0B4J2F2 783 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 ATP2A1O14983 1001 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 KRT5P13647 590 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 HSD17B3P37058 310 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 SIK1P57059 783 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 CLUL1Q15846 466 aa13.55□□□□□ -0.24
RIOK3-201ENST00000339486 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
RIOK3-201ENST00000339486 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
RIOK3-201ENST00000339486 THAP12O43422 761 aa13.54□□□□□ -0.24
RIOK3-201ENST00000339486 TMEM132AQ24JP5 1023 aa13.54□□□□□ -0.24
RIOK3-201ENST00000339486 USP38Q8NB14 1042 aa13.54□□□□□ -0.24
RIOK3-201ENST00000339486 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
RIOK3-201ENST00000339486 GDAP1Q8TB36 358 aa13.54□□□□□ -0.24
RIOK3-201ENST00000339486 DUSP9Q99956 384 aaKnown RBP13.54□□□□□ -0.24
RIOK3-201ENST00000339486 TBK1Q9UHD2 729 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms