RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 MED4Q9NPJ6 270 aa16.63■□□□□ 0.25
TNFSF13-201ENST00000338784 NLRC4Q9NPP4 1024 aa16.63■□□□□ 0.25
TNFSF13-201ENST00000338784 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
TNFSF13-201ENST00000338784 FAM184BQ9ULE4 1060 aa16.63■□□□□ 0.25
TNFSF13-201ENST00000338784 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
TNFSF13-201ENST00000338784 GREB1LQ9C091 1923 aaPredicted RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 NOL4O94818 638 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 TCP1P17987 556 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 RBM5P52756 815 aaKnown RBP eCLIP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 SLC12A3P55017 1021 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ARHGAP4P98171 946 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ICA1Q05084 483 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ITIH3Q06033 890 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 C2orf54Q08AI8 447 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 RAD51AP2Q09MP3 1159 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ZNF572Q7Z3I7 529 aaPredicted RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 GPIHBP1Q8IV16 184 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ERMNQ8TAM6 284 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 CRYGNQ8WXF5 182 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 FAM198AQ9UFP1 575 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 RBAK-RBAKDNI3L0D1 243 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 TBX3O15119 743 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 SERPING1P05155 500 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 TNNT3P45378 269 aaPredicted RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 RASSF7Q02833 373 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ADAM9Q13443 819 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 PRR16Q569H4 304 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ARSHQ5FYA8 562 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 TATDN1Q6P1N9 297 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 MMGT1Q8N4V1 131 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 RNF10Q8N5U6 811 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 ETNPPLQ8TBG4 499 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 NOX5Q96PH1 765 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 OSBPL9Q96SU4 736 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 LSM14BQ9BX40 385 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 FAN1Q9Y2M0 1017 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 HYOU1Q9Y4L1 999 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 PCDHAC2Q9Y5I4 1007 aa16.62■□□□□ 0.25
TNFSF13-201ENST00000338784 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 POTEIP0CG38 1075 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 LMAN1P49257 510 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 POLR2FP61218 127 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 HDLBPQ00341 1268 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 SPIRE1Q08AE8 756 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 EDRF1Q3B7T1 1238 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 Q4G0T1 1027 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 POTEGQ6S5H5 508 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 POTEEQ6S8J3 1075 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 CCNI2Q6ZMN8 369 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 CATSPER3Q86XQ3 398 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 SIAH1Q8IUQ4 282 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 COG1Q8WTW3 980 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 ZHX3Q9H4I2 956 aa16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 LUC7LQ9NQ29 371 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-201ENST00000338784 F5H6K3 240 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 CETN3O15182 167 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 TLR2O60603 784 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 ZMYND10O75800 440 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 AARSP49588 968 aaKnown RBP eCLIP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 HNRNPH2P55795 449 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 FKBP1AP62942 108 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 KLRC3Q07444 240 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 SH3BP5LQ7L8J4 393 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 GMCL1P1Q8NEA9 526 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 ZBTB9Q96C00 473 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 SALL4Q9UJQ4 1053 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 DNM3Q9UQ16 869 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 NPM3O75607 178 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 FOSP01100 380 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 RPA1P27694 616 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 EPS15P42566 896 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 NFRKBQ6P4R8 1299 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 FBXO11Q86XK2 927 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 SPATA4Q8NEY3 305 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 GMCL1Q96IK5 515 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 P2RX7Q99572 595 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 CRACR2AQ9BSW2 395 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 HPCAL4Q9UM19 191 aa16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-201ENST00000338784 ADAMTSL1Q8N6G6 1762 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 IKQ13123 557 aaPredicted RBP16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 GIT2Q14161 759 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 ABCB5Q2M3G0 1257 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 CCDC181Q5TID7 509 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 COL23A1Q86Y22 540 aaPredicted RBP16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 RUBCNQ92622 972 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 FAM20AQ96MK3 541 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 TSKSQ9UJT2 592 aa16.59■□□□□ 0.25
TNFSF13-201ENST00000338784 MYH7BA7E2Y1 1941 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms